Query= MSMg01no495_a05.b1 MSMg01no495_a05.b1 CHROMAT_FILE:
MSMg01no495_a05.b1 PHD_FILE: MSMg01no495_a05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:59 2005
(627 letters)
>mm_chr16_17035626_17036652
Length = 1027
Score = 1189 bits (615), Expect = 0.0
Identities = 624/627 (99%)
Strand = Plus / Plus
Query: 1 tgcaggtagaagagcagtacatgcccaagggaagataactgcaccaccgtgaggcataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcaggtagaagagcagtacatgcccaagggaagataactgcaccaccgtgaggcataaa 260
Query: 61 aactgggagccagggccttaaaatactatgaccagggcaacttaaaaacaaaagtgttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aactgggagccagggccttaaaatactatgaccagggcaacttaaaaacaaaagtgttac 320
Query: 121 cgggcagtggtggcacacgcctttaatcccagcacttgggaggcagaggcaggtagattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 cgggcagtggtggcacacgcctttaatcccagcacttgggaggcagaggcaggcagattt 380
Query: 181 ctgagttcgaggccagccagggctatacagagaaaccctatcttgaaaaaccaaaaaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgagttcgaggccagccagggctatacagagaaaccctatcttgaaaaaccaaaaaaag 440
Query: 241 tgtttaattttataggattagagtccatgacttcatgatgggggcatggaaacggatagg 300
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtttaatttcagaggattagagtccatgacttcatgatgggggcatggaaacggatagg 500
Query: 301 tacagcatagcactagagcagtagctgagaactcaaaatgatataagtctcctacagcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tacagcatagcactagagcagtagctgagaactcaaaatgatataagtctcctacagcct 560
Query: 361 caaaggcctctcctgtgccacatttccaccaacaaggccacacaataatctttcccaaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caaaggcctctcctgtgccacatttccaccaacaaggccacacaataatctttcccaaac 620
Query: 421 agttcaccgactgggaaccaagtatcaaagtatgagccagtagaacccaatattttgtat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agttcaccgactgggaaccaagtatcaaagtatgagccagtagaacccaatattttgtat 680
Query: 481 actaccacagctagaaattgcagtggtccatggcagaaaaggctacgtgaactggccctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 actaccacagctagaaattgcagtggtccatggcagaaaaggctacgtgaactggccctg 740
Query: 541 aggaagtgagagtgaggagttaggcagccaggggctcacactgtgatttcatggctttta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aggaagtgagagtgaggagttaggcagccaggggctcacactgtgatttcatggctttta 800
Query: 601 acagtgtgccattccctggagacggga 627
|||||||||||||||||||||||||||
Sbjct: 801 acagtgtgccattccctggagacggga 827
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space: 627489
Effective search space used: 627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no495_a05.g1 MSMg01no495_a05.g1 CHROMAT_FILE:
MSMg01no495_a05.g1 PHD_FILE: MSMg01no495_a05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:00 2005
(637 letters)
>mm_chr16_17154368_17155407
Length = 1040
Score = 1174 bits (607), Expect = 0.0
Identities = 631/641 (98%), Gaps = 5/641 (0%)
Strand = Plus / Minus
Query: 1 catatacaaacaaattgcacatagaaagaacttcagcacaacagaaactaacatatcagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 catatacaaacaaattgcacatagaaagaacttcagcacaacagaaactaacatatcagc 781
Query: 61 tgcagttcctggttaggctttctttcgatgactgagcttccagctttccacctctttccc 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 tgcagttcccggttaggctttctttcgatgactgagcttccagctttccacctctttccc 721
Query: 121 actgcaggcatttctgtatggtgagataaagtagaaacttattgttgggaatgactcaac 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 720 actgcaggcatttctgtatggtgagataaagtagaaacttattgttgggaatgactcacc 661
Query: 181 ttctgtcttcaaggcaccagctgtgttttctcttaggctttcttgttgttctctacttgc 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ttctgtcttcaaggca-cagctgtgttttctcttaggctttcttgttgttctctacttgc 602
Query: 241 tgtcattgcattgggagcatagtgttcgtcctcagataagggaccttggagggtacctga 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgtcactgcattgggagcatagtgttcgtcctcagataagggaccttggagggtacctga 542
Query: 301 tgtcatcatgcttggttctgaaattggagggacaggcagcccctcttccaaagccagctt 360
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 541 tgtcatcatgcttggttctgaaattggagggacaggcagcctctcttccaaagccagctt 482
Query: 361 ctcagtgagtcaaaacagcacatgacagttcaccagtaaaatgtgtgtcccaccaaggtg 420
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctcagtgagacaaaacagcacatgacagttcaccagtaaaatgtgtgtcccaccaaggtg 422
Query: 421 aggctgggatctgtcagccg----ctaagctgtaatctgtctctcctgattacagaagtt 476
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 421 aggctgggatctgtcagccgctaactaagctgtaatctgtctctcctgattacagaagtt 362
Query: 477 gagttctggtggtcagaattttgaatacacagaaggccactttgtctttaaaacacattt 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gagttctggtggtcagaattttgaatacacagaaggccactttgtctttaaaacacattt 302
Query: 537 gtgggcatgagacatagttcacttggtacagagccagccagaatgtgctgtgtatggagt 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtgggcatgagacatagttcacttggtacagagccagccagaatgtgctgtgtatggagt 242
Query: 597 caccctgacttcatagaaacaaatatagtggcattgggctg 637
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caccctgacttcatagaaacaaatatagtggcattgggctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1040
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1030
Effective search space: 645810
Effective search space used: 645810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
