NCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTCACATTCTTAGAGGTGGAGCAATCTAACAACTGAATGGCAAAA
GCTGTATTTTTAAGCCAGTCCATGAAGAGAGAGGCTGATATTAGGTGATG
TTACAGAAAGGTGGTACTCATGTACAGAAAGCAGTGAAGGGGAATAAATC
AGAATGAGGGTATGAGCCAACACACACCAGGAGTAGCTATTCAGAGGACC
AGAAATAAAACTTAGAAAGTAGATTTCTGTTTCAATAGAACAGAAATTTG
ATTAAATCCTAAGATACACAATAATAATTATTAATTTTGGTTAGGTTTCA
TTTAGTCATATAATGTAAGATTGCTTTTACCATCATTAAAAATGAAGGGT
ACACAAATTAGCAAAATACTCTCAGGTATCTATCATGCCCCAATGTTAAT
AAAGCAGAGAAACAGGACCAGCCAGAGTACTACTCAGCCCTAAGGTAGTG
CATTTCACAGAACACAGGGCTTCCTAAGTACGTATGGATTCTAGGAGGGC
AAATGAATTGAAACCTCATTAGGGAAAGGACTTTTCTTTGTGTGAAGTGT
ATGGTATTAAAAGCTTCTCAGAATAGCTTCCATGATTGAAAACAAAATGG
GTAGGTATGTTTTTTTTCTACAAAAACCAAGATAATGGAAAACAATAAAT
TTCTAGAAAGATTATGTTTCCCGGAAAAAAAAAACACCAGAACCAGAGGA
AAACTATATTTTACTTCATAAAATGCACTCT

NNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGATCAGGCTTCGTGATAAGT
ACCAGCTGAAGGTACTCGCTCTCGCTCTCGCTCTCTTGCTCTGTCTCTCT
CTCATTGTCTGTCTCAACGCTACTTTAATTTGCCACTGAGTGTTCTTAAA
ATTACTACAAAACCCAGAAGCCTGATTTGGCATAGGGTTCTCAATTTTGG
CAGAGAAAAAAGAAAAATCTGACAGAATTTTAGGTAACTGCGAAACTTCA
TGAGAATATAATCCTTATTAGTAGCATTAAACTCAGCCCGCAAGTAACAG
ATTACTGTGTTTTCAAAGCCCACTTTGTGTTGATCGTCTTTACGTTCCTT
TCCGCCCCGCCCTACCCTTCTATTCCCAGTAGCCCCCTCAGAATGCTGCA
TTAATTTTCAACCTTCATTTTTGTCTTTGAGCAAAAGGCGATCACGTCAA
TTTCCAAATGGCTTAGTAGTTTCATAGGCGTTATTTTGGGAGCTCAGTGG
GCAACCTGGCTTTTTTTTGAGAGAGAACAGCGACATCTCTTGGCCGCCAC
GGGTACTGCGCGTTCAGGGGAGGTTGCAAATTGCACCTCATTGGGTTCTC
CGACACATACATCTGTGAGGCGAAGTTTTCAGTGGTTGTTGTGGTCGAAA
GCAGAGCCACACGAAAACATCCGAGAGTCAGAAAAGATGATAGCGGTGCT
AATCTCATTCTGATGTTTTGACAGGGCCTGACTGGA

Query= MSMg01no496_f24.g1 MSMg01no496_f24.g1 CHROMAT_FILE:
MSMg01no496_f24.g1 PHD_FILE: MSMg01no496_f24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:41 2005
         (493 letters)



>mm_chr16_78198936_78199829
          Length = 894

 Score =  793 bits (410), Expect = 0.0
 Identities = 470/498 (94%), Gaps = 17/498 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   agatcaggcttcgtgataagtaccagctgaaggtactcgctctcgctctcgctctcttgc 60
           |||||||||||||||||||||||||||||||||||||||||          |||||  ||
Sbjct: 776 agatcaggcttcgtgataagtaccagctgaaggtactcgct----------ctctc--gc 729

                                                                       
Query: 61  tctgtctctctctca---t-tgtctgtctcaacgctactttaatttgccactgagtgttc 116
           |||||||||||||||   | ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 728 tctgtctctctctcaacgtctgtctgtctcaacactactttaatttgccactgagtgttc 669

                                                                       
Query: 117 ttaaaattactacaaaacccagaagcctgatttggcatagggttctcaattttggcagag 176
           ||||||||||||||||| || ||||||||||||||||||||||||||| |||||| ||||
Sbjct: 668 ttaaaattactacaaaaaccggaagcctgatttggcatagggttctcagttttggaagag 609

                                                                       
Query: 177 aaaaaagaaaaatctgacagaattttaggtaactgcgaaacttcatgagaatataatcct 236
           ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 608 aaaaaagaaaaatctaacagaattttaggtaactgcgaaatttcatgagaatataatcct 549

                                                                       
Query: 237 tattagtagcattaaactcagcccgcaagtaacagattactgtgttttcaaagcccactt 296
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 548 tattagtagcattaaactcagcccgcaagtaacagattactgtgttttcacagcccactt 489

                                                                       
Query: 297 tgtgttgatcgtctttacgttcctttccgccccgccctacccttctattcccagtagccc 356
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 488 tgtgttgatcgtctttacgttcctttccgccccgccccacccttctattcccagtagccc 429

                                                                       
Query: 357 cctcagaatgctgcattaattttcaaccttcattttt-gtctttgagcaaaaggcgatca 415
           ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 428 cctcagaatgctgcattaactttcaaccttcattttttgtctttgagcaaaaggcgatca 369

                                                                       
Query: 416 cgtcaatttccaaatggcttagtagtttcataggcgttattttgggagctcagtgggcaa 475
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 cgtcaatttccaaatggcttagtagtttcataggcgttattttgggagctcagtgggcaa 309

                             
Query: 476 cctggcttttttttgaga 493
           | ||||||||||||||||
Sbjct: 308 cgtggcttttttttgaga 291


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 894
Length adjustment: 10
Effective length of query: 483
Effective length of database: 884
Effective search space:   426972
Effective search space used:   426972
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)