Query= MSMg01no497_e19.b1 MSMg01no497_e19.b1 CHROMAT_FILE:
MSMg01no497_e19.b1 PHD_FILE: MSMg01no497_e19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:56 2005
(640 letters)
>mm_chr16_27254366_27255405
Length = 1040
Score = 1170 bits (605), Expect = 0.0
Identities = 629/639 (98%), Gaps = 5/639 (0%)
Strand = Plus / Plus
Query: 5 gaattccctttaca---ttacaatctttttagtgaatttactttcaaacttctttgttat 61
|||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattccctt--caatattacaatctttttagtgaatttactttcaaacttctttgttat 261
Query: 62 ttaattgagatgtttgtcttctctcaggcttcattcacatccttattgctagtcctaata 121
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ttaattgagctgtttgtcttctctcaggcttcattcacatccttattgctagtcctaata 321
Query: 122 ctgtgaccctttaatactgctcctcatgttttaacttccaactataaaattattttcatt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ctgtgaccctttaatactgctcctcatgttttaacttccaactataaaattattttcatt 381
Query: 182 ggtacttaataactgtaactttatcagtgttatgcattgtaatgtaaatagctttgtttt 241
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 382 ggtacttaataactgtaactttatcagtgttatgcattgtaatgtaaatatctttgtttt 441
Query: 242 ctggtggtccattgacccttaaaggggttgcaatccacaggttgagagctactactctat 301
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 442 ctggtggtccattgacccttaaaggggttgcaatccacaggttgagagctactgctctat 501
Query: 302 atctgcagtagtcttttgattcgtatagtctctaaactttaatgatcttcaatgaagatc 361
|| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 502 atgtgcagtagtcttttgattcgtatagtctttaaactttaatgatcttcaatgaagatc 561
Query: 362 atgattcttctttgggttatgtgttctggcattcatctagataattctcattaaagaacg 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 atgattcttctttgggttatgtgttctggcattcatctagataattctcattaaagaacg 621
Query: 422 attctataagactggtgcttttgtgaggatacatccttgtcccttcatatttcttgcatt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 attctataagactggtgcttttgtgaggatacatccttgtcccttcatatttcttgcatt 681
Query: 482 tttgcaatgagatctgctcaagtgggcacctctcatgtctgtgtgtatgatgtgagattc 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tttgcaatgagatctgctcaagtgggcacctctcatgtctgtgtgtatgatgtgagattc 741
Query: 542 tatgctgtcactgttgagtagaagatatatatagagggtaatagtaaaataccacaaata 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tatgctgtcactgttgagtagaagatatatatagagggtaatagtaaaataccacaaata 801
Query: 602 tcttctgcctcattcccaatttcttgtcctttttaaagt 640
|||||||||||||||||||||||||||||||||||||||
Sbjct: 802 tcttctgcctcattcccaatttcttgtcctttttaaagt 840
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space: 648900
Effective search space used: 648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no497_e19.g1 MSMg01no497_e19.g1 CHROMAT_FILE:
MSMg01no497_e19.g1 PHD_FILE: MSMg01no497_e19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:56 2005
(623 letters)
>mm_chr16_27401457_27402479
Length = 1023
Score = 1181 bits (611), Expect = 0.0
Identities = 620/623 (99%)
Strand = Plus / Minus
Query: 1 atgttgaaacttaaataaaagcaacgatttatagaatagaaagataggtgtgtaagctta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 atgttgaaacttaaataaaagcaacgatttatagaatagaaagataggtgtgtaagctta 764
Query: 61 aacatgtgcatagatgcacaaatgtcatactcacacacacacagagacgggcacactcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 aacatgtgcatagatgcacaaatgtcatactcacacacacacagagacgggcacactcac 704
Query: 121 acaaaacactagtctaagcacaaaagagacattttaaaaagtagaacaatctaatctcaa 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 703 acaaaacactagtctaagcacagaagagacattttaaaaagtagaacaatctaatctcaa 644
Query: 181 aattttaactcttatgcagtttatcaaagtaaatttctgtgccactaatgtctcctacgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 aattttaactcttatgcagtttatcaaagtaaatttctgtgccactaatgtctcctacgg 584
Query: 241 ccaaattcaaagctaagtgtaaaaccagtaacttaaaccacttatttggcaagcagcact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 ccaaattcaaagctaagtgtaaaaccagtaacttaaaccacttatttggcaagcagcact 524
Query: 301 atagctaaccacagacatagcagattataggccagcagttctgaaaatgctgagatgata 360
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 ataactaaccacagacatagcagattataggccagcagttctgaaaatgctgagatgata 464
Query: 361 caagtcatcaaatcagaagtactactttactatcgcaggccacttacttcattatcaaga 420
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 463 caagtcatcaaatcagaagtactactttactatcgcaagccacttacttcattatcaaga 404
Query: 421 ccacagagaaactaagtgagtattcaaagagaaaacactgagtcaggaatttccatctgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ccacagagaaactaagtgagtattcaaagagaaaacactgagtcaggaatttccatctgc 344
Query: 481 cagggaaaatgactggggctcagagcagcagggaaaactccaggaaagcagcaggggaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 cagggaaaatgactggggctcagagcagcagggaaaactccaggaaagcagcaggggaca 284
Query: 541 gaagaattgttactcatactggtgacacttcttgaaagaaataactttccattagtaact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gaagaattgttactcatactggtgacacttcttgaaagaaataactttccattagtaact 224
Query: 601 catgttgcccttataagtttaga 623
|||||||||||||||||||||||
Sbjct: 223 catgttgcccttataagtttaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1023
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1013
Effective search space: 620969
Effective search space used: 620969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
