Query= MSMg01no499_g03.b1 MSMg01no499_g03.b1 CHROMAT_FILE:
MSMg01no499_g03.b1 PHD_FILE: MSMg01no499_g03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:45 2005
(414 letters)
>mm_chr16_24817693_24818506
Length = 814
Score = 762 bits (394), Expect = 0.0
Identities = 409/414 (98%)
Strand = Plus / Plus
Query: 1 gaggccctgtctcaaaacaacaacaacaaacatttgtgagaaaatatggccttgattacc 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 gaggccctgtctcaaaacaacaaccacaaacatttgtgagaaaatatggccttgattacc 260
Query: 61 atattctgatggtatatctcttgaagatagctactcaaaaacaaaatcttacaattactc 120
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 261 atattctgatggtatatctcttgaagataactactcaaaaacaatatcttacaattactc 320
Query: 121 agagggaactgtaaattattggaacaactacagattatttaggtaattcaggatacccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agagggaactgtaaattattggaacaactacagattatttaggtaattcaggatacccaa 380
Query: 181 acaagaggcaggttctagcaaacctcaaaaatatttaatctcccactgtttgctcccact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acaagaggcaggttctagcaaacctcaaaaatatttaatctcccactgtttgctcccact 440
Query: 241 tctgttttttttgtttttttgagacagggtttctctgtagagctctggctgtcctggaac 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctgttttgtttgtttttttgagacagggtttctctgtagagctctggctgtcctggaac 500
Query: 301 tcactttgtagaccagggtggcctcgaactcagaaatctgcctgtctctgcttcccgagt 360
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcactttgtagaccaggctggcctcgaactcagaaatctgcctgtctctgcttcccgagt 560
Query: 361 gctgggatcaaaggcgtgtaccaccacgcccggctttgctctcatttcttaggt 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gctgggatcaaaggcgtgtaccaccacgcccggctttgctctcatttcttaggt 614
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no499_g03.g1 MSMg01no499_g03.g1 CHROMAT_FILE:
MSMg01no499_g03.g1 PHD_FILE: MSMg01no499_g03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:45 2005
(196 letters)
>mm_chr16_24963896_24964490
Length = 595
Score = 263 bits (136), Expect = 5e-75
Identities = 163/178 (91%), Gaps = 12/178 (6%)
Strand = Plus / Minus
Query: 1 aattattaatataggaacatgaagtagaaaagagttttgtttatatttgaattatataaa 60
|||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 383 aattattaatataggaacatga----------agttttgtttatatttgaattatataaa 334
Query: 61 ttagctttaacatacaaaaagagtagagctgggagatgtctcacttggcaaagtgcttat 120
|||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ttagctttaaaatac-aaaagagtagagctgggagatgtctcacttggcaaagtgcttat 275
Query: 121 caaggaatctcagagacctgccttcattcactaggacttaggttttt-tttttttttt 177
||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 274 caaggaagcacagagacctgccttcattcactaggacttaggtttttgtttttttttt 217
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 196
Length of database: 595
Length adjustment: 8
Effective length of query: 188
Effective length of database: 587
Effective search space: 110356
Effective search space used: 110356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
