Query= MSMg01no501_f15.b1 MSMg01no501_f15.b1 CHROMAT_FILE:
MSMg01no501_f15.b1 PHD_FILE: MSMg01no501_f15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:10 2005
(649 letters)
>mm_chr16_63045769_63046817
Length = 1049
Score = 1007 bits (521), Expect = 0.0
Identities = 536/541 (99%)
Strand = Plus / Minus
Query: 109 aactaatagtgctatattattttttaaatgtcatacaattaatatatttggagttattta 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1049 aactaatagtgctatattattttttaaatgtcatacaattaatatatttggagttattta 990
Query: 169 aaatttatattgaaaaaatatgtattttcagtattgctgtagacatctacataagactat 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 989 aaatttatattgaaaaaatatgtattttcagtattgctgtagacatctacataagactat 930
Query: 229 tcaattgattgttgtcatatataaacaatttttataatactcatttttattgttacaaaa 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 929 tcaattgattgttgtcatatataaacaatttttataatactcatttttattgttacaaaa 870
Query: 289 aatatcttataaattttaaagaatgtgatgataagtattcctacatatgttctcatgaaa 348
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 869 aatatcttataaattttaaagaatgtgatgataagtatacctacatatgttctcatgaaa 810
Query: 349 atgcttgtgttaatttaagttcaacactgtaaaaatatttcatattttatatgccttctg 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 atgcttgtgttaatttaagttcaacactgtaaaaatatttcatattttatatgccttctg 750
Query: 409 aatatatgtacatatatgctatcaaaatgaataagatttaaattaagaattattatgtgt 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 aatatatgtacatatatgctatcaaaatgaataagatttaaattaagaattattatgtgt 690
Query: 469 ggtatcagttatgtttctgaaatattgctttgccataacgctatatttaacagttcttac 528
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 689 ggtatcagttatgtttctgaaatattgctttgccataatgctatatttaacagttcttag 630
Query: 529 atattaatgcttctcaatgtgattcataaaccttgacatgtatattctatcaccataaat 588
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 629 atattaatgcttctcaatgtgattcataaacgttgacatgtatattttatcaccataaat 570
Query: 589 ggtcatctatatgcttaaaataggcttgtgaggtaaaactcaacttcatgtggttaatga 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ggtcatctatatgcttaaaataggcttgtgaggtaaaactcaacttcatgtggttaatga 510
Query: 649 g 649
|
Sbjct: 509 g 509
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no501_f15.g1 MSMg01no501_f15.g1 CHROMAT_FILE:
MSMg01no501_f15.g1 PHD_FILE: MSMg01no501_f15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:10 2005
(365 letters)
>mm_chr16_62896283_62897049
Length = 767
Score = 509 bits (263), Expect = e-148
Identities = 356/421 (84%), Gaps = 56/421 (13%)
Strand = Plus / Plus
Query: 1 cataggacagaactgatgcacatacacattcgcaacagctgtggatgtctgcacaagatc 60
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 147 cataggacagaactgatgcacatacacattcacagcagctgtggatgtctgcacaagatc 206
Query: 61 aagttgacattctcaaaattctagtgtccagtgagaagggggctatgagctcacacctgt 120
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 207 aagttgacattctcaaaattctagtgtccagtgagaagggggccatgagctcccacctgt 266
Query: 121 agctggggagctatggacagatgatggtatc--------------------------aga 154
|||||||||||||||||||||||||||| || |||
Sbjct: 267 agctggggagctatggacagatgatggtctcagagagagagagagagacagagagagaga 326
Query: 155 gagagacagag------------agagagacagag----------------agacagaaa 186
||||||||||| |||||||||||| |||||||||
Sbjct: 327 gagagacagagagacagagagacagagagacagagacagagagagacagacagacagaaa 386
Query: 187 gacagagacagatagagagagagattagccttacactaagacatatttgggcagaatact 246
||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 387 gacagagacggatagagagagagattagccttacactaagacatatatgggcagaatact 446
Query: 247 ttgaagttagagaattttcatacccgtacgtcagcagaatggctgtgtgcagaagacctg 306
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 447 ttgaagttagagaattttcatacccgtacctcagcagaatggctgtgtgcagaagacctg 506
Query: 307 aagacatacaacattagtagacatactaacatagaagagggcaatctcaat-ccc-cccc 364
|||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 507 aagacataaaacattagtagacatactaacatagaagagggcaatctcaattccctcccc 566
Query: 365 c 365
|
Sbjct: 567 c 567
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 767
Length adjustment: 9
Effective length of query: 356
Effective length of database: 758
Effective search space: 269848
Effective search space used: 269848
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
