XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAGAA
TTTCTCCAACAAGAACAATTATAACAAAACCAAGGAGTTCCCAATACTTT
TTCAATCAACAAAGCAAAAGAATTTTGTTCTTTTTGCTTACCATTTTGCC
TCTTCTAAGACTCATGTCAATTAAAACATGGATTTTATTTAACATGCTTT
TAAAGAAGGAGAAATATAATTGGAGGGATTTTAGAAGGCCCATCTTATTC
ATAAGGTAGACTGCTCATGACGACTACAGTTTCTAGAATGTTATGAGAAA
TAGTGTGTTGGATATAGTTGGTGGATGGCTGCCCAGCCATAGTTGAAGAG
TGTCAGTAAGTTCTACTGTACTATTTCCATGATATGTTGTCTGTAAGTAG
TGAAAATGCAGTTTACAGATCAAAAAAAAATTTTTGGACATTTTGTCACA
GTGAAATTATAAATGTTTGGGGAAATGAATATGCTTACACTGATTTAAAA
GTTGCCTTATATGTGTATGTATGAATGTCGTATATTACCCAATAAATATG
TACTCTTTTTATGTCTCCATTTAGTGCATTTAAAAGGAATAACATAAAAC
AAGTGCTTGCTCAAATTCATTATTATGTGAAGCTTTTGCTTCACAGAGAA
TACAGTGTTTCAAGTGTCCTGTACATATCAAGATTT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXCTTCTTTATGTCCTCTACCATCATCATGAGATATGCTTTTA
AATCCAGGTCTACCTTTTCAGGTGTGTTAGGGTGTCCTGGATTGGGCGAA
GTGGGCGTTCTGGGTTCTGATGATGGTGAGTGGTCCTGGCTTCTGTTAGT
AGGATTCTTACGTTTACCTTTCGCCATCTGGCAATCTCTGGAGTTAGTTG
TTATAGTTGTCTTTGTTAAAAGATTGTTCCTCTGTTGATTTTGTTACCCT
CTATCATCAGGCGTGGGAGACAAGCTCTCTTCTCTGAGTTTCAGTGGTCA
GAGCAGTCTCTGTAGGCAAGCTCTCCTCTCTCAGGGAAGGTGTACAGTTA
TCTGGTGTTTGGACCTCCTCCTGGCTGAAGGTGAAGGCCCAAAACAGGAT
CTTTCCCAGAAGCTGTGTTGCTTTGGCCAGGAAGGTGGCCAGTTGTCTGG
AGTCGAAGATGTTGCAGCCTCAGAAGCTCTGTGGCTCTTGCCGGGAAGGT
GGCTGGTTGTCTGGAGCTGAAGATGGTGCCGCCCCAAAATCTCTGCGACT
CTCTCGCCCGTCCCAGAAACGGCTGGCACTCTGTATTTCACACGGTCACC
CGTGCAGCCTGCCCTCCGCGGAGTCCCGGAG

Query= MSMg01no501_f17.b1 MSMg01no501_f17.b1 CHROMAT_FILE:
MSMg01no501_f17.b1 PHD_FILE: MSMg01no501_f17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:11 2005
         (583 letters)



>mm_chr16_85632035_85633017
          Length = 983

 Score = 1002 bits (518), Expect = 0.0
 Identities = 565/582 (97%), Gaps = 6/582 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccagaatttc-tccaacaagaacaattataacaaaaccaaggagttcccaatact 63
           ||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagaattacatc-aacaagaacaattataacaaaaccaaggagttcccaatact 263

                                                                       
Query: 64  ttttcaatcaacaaagcaaaagaattttgttctttttgcttaccattttgcctcttctaa 123
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 264 ttttcaatcaacaaagcaaaagaattttgttctttctgcttaccattttgcctcttctaa 323

                                                                       
Query: 124 gactcatgtcaattaaaacatggattttatttaacatgcttttaaagaaggagaaatata 183
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gactcatgtcagttaaaacatggattttatttaacatgcttttaaagaaggagaaatata 383

                                                                       
Query: 184 attggagggattttagaaggcccatcttattcataaggtagactgctcatgacgactaca 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 attggagggattttagaaggcccatcttattcataaggtagactgctcatgacgactaca 443

                                                                       
Query: 244 gtttctagaatgttatgagaaatagtgtgttggatatagttggtggatggctgcccagcc 303
           |||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 444 gtttctaggatattatgagaaatagtgtgttggatatagttggtggatggctgcctagcc 503

                                                                       
Query: 304 atagttgaagagtgtcagtaagttctactgtactatttccatgatatgttgtctgtaagt 363
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 504 atagttgaagagtgtcagtaagttctactgtactatttccatggtatgttgtctgtaagt 563

                                                                       
Query: 364 agtgaaaatgcagtttacagatcaaaaaaa--aatttttggacattttgtcacagtgaaa 421
           ||||||||||||||||||||||||||||||  |  |||||||||||||||||||||||||
Sbjct: 564 agtgaaaatgcagtttacagatcaaaaaaagga--ttttggacattttgtcacagtgaaa 621

                                                                       
Query: 422 ttataaatgtttggggaaatgaatatgcttacactgatttaaaagttgccttatatgtgt 481
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ttataaatgttgggggaaatgaatatgcttacactgatttaaaagttgccttatatgtgt 681

                                                                       
Query: 482 atgtatgaatgtcgtatattacccaataaatatgtactctttttatgtctccatttagtg 541
           ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 682 atgtatgaatgtcatatattacccaataaatatgtactctttttatgtgtccatttagtg 741

                                                     
Query: 542 catttaaaaggaataacataaaacaagtgcttgctcaaattc 583
           ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 742 catttaaaaggaataacataaaacacgtgcttgctcaaattc 783


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space:   557529
Effective search space used:   557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)