Query= MSMg01no501_n01.b1 MSMg01no501_n01.b1 CHROMAT_FILE:
MSMg01no501_n01.b1 PHD_FILE: MSMg01no501_n01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:42 2005
(341 letters)
>mm_chr16_96711964_96712704
Length = 741
Score = 659 bits (341), Expect = 0.0
Identities = 341/341 (100%)
Strand = Plus / Minus
Query: 1 gtggcctcattatcacccacaggttaaaggtatcaagaatacttggatgaagtagcctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 gtggcctcattatcacccacaggttaaaggtatcaagaatacttggatgaagtagcctga 359
Query: 61 cccacaggttaaaggtatcaagaatacttggatgaagtagcctgaccaataacaaagggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 cccacaggttaaaggtatcaagaatacttggatgaagtagcctgaccaataacaaagggc 299
Query: 121 tgaatagtaggatagctgtaaggttgtttttaagtttatagatagcacatgtaccagagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 tgaatagtaggatagctgtaaggttgtttttaagtttatagatagcacatgtaccagagt 239
Query: 181 taaactatgctaaaataaatgactatgtggctagaagaatggatggactattggatggat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 taaactatgctaaaataaatgactatgtggctagaagaatggatggactattggatggat 179
Query: 241 tgattgatcaatggatagattaatggatgtgttataaatgaatagatgtatagaataatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 tgattgatcaatggatagattaatggatgtgttataaatgaatagatgtatagaataatg 119
Query: 301 gatggatggatcaatagatcaatgggtggatcaattaacaa 341
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 gatggatggatcaatagatcaatgggtggatcaattaacaa 78
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no501_n01.g1 MSMg01no501_n01.g1 CHROMAT_FILE:
MSMg01no501_n01.g1 PHD_FILE: MSMg01no501_n01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:42 2005
(495 letters)
>mm_chr16_96539701_96540594
Length = 894
Score = 934 bits (483), Expect = 0.0
Identities = 492/495 (99%), Gaps = 1/495 (0%)
Strand = Plus / Plus
Query: 1 acaaacctcccatttagactagccttctcacgaggtcatgtgtggccaagtctggcatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acaaacctcccatttagactagccttctcacgaggtcatgtgtggccaagtctggcatat 260
Query: 61 tgagttcagtccttgagatctgtgtggttgaaggagagaattaatctttacaagcccgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgagttcagtccttgagatctgtgtggttgaaggagagaattaatctttacaagcccgca 320
Query: 121 gtggcacatatgtgcctgcacacatgtgcatgcaaaactgtaataagtaacatgtaaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtggcacatatgtgcctgcacacatgtgcatgcaaaactgtaataagtaacatgtaaatg 380
Query: 181 agacaatttttgcaaagactccttcaaacagtgacctctgaaggtctttgcttattttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agacaatttttgcaaagactccttcaaacagtgacctctgaaggtctttgcttattttta 440
Query: 241 tttctgtgttgctctccatgatgcaaatccttgtgtgtgaacactggcacaggtgtagta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttctgtgttgctctccatgatgcaaatccttgtgtgtgaacactggcacaggtgtagta 500
Query: 301 ggaaaaaaaaaaccctctcagttaggattatttgcaaaatgccttagtttggttgggaat 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 g-aaaaaaaaaaccctctcagttaggattatttgcaaaatgccttagtttggttgggaat 559
Query: 361 tcaatagaaaattttgccagggtcttgccccaggtctgtctagttccctacttgttaatt 420
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcaatagaaaattttgtcagggtcttgccccaggtctgtctagttccctacttgttaatt 619
Query: 421 taactcccaggataagaccctcagagccggccttagattgatcctggaggtgaagggtga 480
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 620 taactcccaggataagaccctcagagccggccttagactgatcctggaggtgaagggtga 679
Query: 481 aaccatccaagctca 495
|||||||||||||||
Sbjct: 680 aaccatccaagctca 694
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 894
Length adjustment: 10
Effective length of query: 485
Effective length of database: 884
Effective search space: 428740
Effective search space used: 428740
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
