Query= MSMg01no504_j12.b1 MSMg01no504_j12.b1 CHROMAT_FILE:
MSMg01no504_j12.b1 PHD_FILE: MSMg01no504_j12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:14 2005
(632 letters)
>mm_chr16_54877802_54878833
Length = 1032
Score = 1145 bits (592), Expect = 0.0
Identities = 622/632 (98%)
Strand = Plus / Plus
Query: 1 gttactttcagagtcctgactaatacatcatttcaatataagtctaagaggctaaaagca 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 gttactttcagagtcctgactaatacatcatttcaatataagtctaagaggctaaaagta 260
Query: 61 caaaactcataactgaactaaaatctaatggttaatttcatgttattgctatgtttaatt 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaaacacataactgaactaaaatctaatggttaatttcatgttattgctatgtttaatt 320
Query: 121 ttgaaaataaataaaacccacatgtccaaacttgacacaattaaattatgatgaatggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 ttgaaaataaataaaacccacatgtccaaacttgacacaattaaattatgatgaatgcat 380
Query: 181 tacaatagacaatagatatactgccttctttttttcaatctttttaaaaaaattttttaa 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tacaatagacaatagatatattgccttctttttttcaatctttttaaaaaaattttttaa 440
Query: 241 ttaggtatttttctcatttacatttccaatgctatcccaaaagtcccccataccctcccc 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttaggtattttcctcatttacatttccaatgctatcccaaaagtcccccataccctcccc 500
Query: 301 caactcacctacccacccactcccacttcttggccctggcattcccctgtactgaggcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caactcacctacccacccactcccacttcttggccctggcattcccctgtactgaggcat 560
Query: 361 ataaagtttgcacgaccaatgggcctctctttccactgatggccggctaggccatctttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ataaagtttgcacgaccaatgggcctctctttccactgatggccggctaggccatctttt 620
Query: 421 gatacatatgcagctggagacacgagctccagggggtactggttagttcatattgttgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gatacatatgcagctggagacacgagctccagggggtactggttagttcatattgttgtt 680
Query: 481 ccacctatagggttgcagatccatttagctccttggataatttctctagttcctccattg 540
|||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||
Sbjct: 681 ccacctatagggttgcagatccatttagctccatggatactttctctagctcctccattg 740
Query: 541 ggggccctatgatccatcaaatagctgactgtgagcatctacttctgtgtttgctaagcc 600
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 741 ggggccctatgatccatccaatagctgactgtgagcatctacttctgtgtttgctaggcc 800
Query: 601 ccggcagagtctcacaagagacagctatatca 632
||||||||||||||||||||||||||||||||
Sbjct: 801 ccggcagagtctcacaagagacagctatatca 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no504_j12.g1 MSMg01no504_j12.g1 CHROMAT_FILE:
MSMg01no504_j12.g1 PHD_FILE: MSMg01no504_j12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:14 2005
(599 letters)
>mm_chr16_55050893_55051887
Length = 995
Score = 1046 bits (541), Expect = 0.0
Identities = 583/599 (97%), Gaps = 4/599 (0%)
Strand = Plus / Minus
Query: 1 cagtcactttgagactgtaattgttttctctctaaatggtgtgaggctacttagctgaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 cagtcactttgagactgtaattgttttctctctaaatggtgtgaggctacttagctgaag 736
Query: 61 tagtagttttagatttctgtttcctaacccaatacgcctgcttcacctctgtctacagtg 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 735 tagtagttttagatttctgtttcctaacccaatacccctgcttcacctctgtctacagtg 676
Query: 121 cttataagtgttaatgaagtcttctctcattactttgcctgagttgtcctccaagctctt 180
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 675 cttataagtgttaatgaagtcttctctcattactttgcctgagtagtcctccaagcactt 616
Query: 181 cagggatatgcttagggatatttaagcctatggcatcaatgctggttgatttgctcagtc 240
||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 615 cagggatgtgcttaggggtatttaagcctatggcatcaatgctagttgatttgctcagtc 556
Query: 241 attttgtgcatgcttttgaaaggagaggatgaagggaatatcaaggagagcagctgacaa 300
| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 agttggggcatgcttttgaaaggagaggatgaagggaatatcaaggagagcagctgacaa 496
Query: 301 ttacaggactccttcctagcactgacgcattcagactatgtttctttgcaggatcaattt 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 495 ttacaggactccttcctagcactgacgcattcagactatgtttctttgcaggataaattt 436
Query: 361 ttttttccagaggcataattgcatcaagcagtgagctggaacaaaatgatttaaccaccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ttttttccagaggcataattgcatcaagcagtgagctggaacaaaatgatttaaccaccc 376
Query: 421 aaagtgagcaaccttttttttttttttctaatttgatagtgacagatgcatggaatagac 480
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aaagttagcaaccttttttttttttttctaatttgatagtgacagatgcatggaatagac 316
Query: 481 attgactcatagaaactagtagaatctaaaaacgtctatagattacatctaatggccatt 540
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 315 attgactcatagaaactagtagaatctaaaaatgtctatagattacatctaatggccatt 256
Query: 541 ttcatcagcttttttttttaaaaatacctacaagcaagttttccatacaattttgatca 599
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 255 ttcatcagcttttttttt----aatacctacaagcaagttttccatacaattttgatca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 995
Length adjustment: 10
Effective length of query: 589
Effective length of database: 985
Effective search space: 580165
Effective search space used: 580165
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
