TGGGATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCCTGAGTTTCTCCAGACTTTTATCATGAAGGAGTGTTGGAT
CTTGTCAAATGCTTTCTTAGCATCTAAAGAGATGATCATGTGGTTTTTTT
TTCCCTTTGAGTTTGTTTATATAATGGATTACATTGATGGATTTCCATAT
TTTAAACCATCCCTGCATCCCTGGGATGAAGCCTTCTTCATCATGATGAA
TGATCATTTTGACGTGTTTTTGGATTCAGTTTGCAAGGATTTTATTGAGT
ATTTTAGCATTAATATTCTTAATGGAAATTGGTCTGAATTTCTCTTTCTT
TGTTGGGTGTTTGTGTGGTTTAGGTATCAAAGTAATTGTGGCTTCATAGA
ATGAACTGGGTATAGTACCTTCTGTTTCAATTTTGTGGAATAGTTTCAGG
AGAATTGGAATTAGGTCTTTGAAGGTCTGATAGAACTCTGCACTTCACCC
ATCTGGTCCTGGGCTTTTCTTTTCATTTGGAGACTATTAATGACTGTTTC
TATTTCTTTAGGGGAATTAGGACTGTTTAGATCATTAATCTAATCCTGGT
TTAACTTTGGTACCCGGTATCTGTCTAGGAAATTGTCCATTTCTTTCAGG
GTTTCCAGATTTGTTGAACATAGCCTTTTGTAGTAGGATCTGATGATGCT
TTGGAATTCCTCAGGGTCTGTTGTAATGTCCCCCTTT

NNNGGCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXACTGGACCACGATGTCAAGGA
GCAGGAAAGAAAGCCAATACATAGCTCTCATGTGCATCCTATTTGTGCTT
AAATAAAACCACAAAAAGGAGGGGAGGGAAGGAGAGGTAGAGACAGAGAG
AGATAGAGAAGAGAGAATTAGGAAGACCTCAGTTTCATCTAAATTCTCTT
GGCATGGTTCGATGCGATAGAAACTCAATTATAGACTGGATGAAGGAATG
GGCATCCAGAGCAGTGCTTTGTAAAATTGTTCACCCACAAGTTACAAAGC
ATGGATGGGAAGACTGAGTGAGCAGCAGCCTTGTTAAACTGAGTGATAGT
TAACGGAGACCCTTCTTCTCATCTGTCCTTGACTTTCCATCCCACCCCAT
GGAGAAGGAGATAGGTGGTTACAGTGTAACATGTGAGGCAAGTGACTGTA
ACTTTAAAACCTGACATTGCTTATCAGAAATTGCCTTGGACTTTATCTCT
ATCTCAGTAATACTGTGAAAGGGTATTTTTTTTTTAAATTCCCATTTTAC
AGAAGAGCTACAGAGATTCAGAGCCAGGAAGCTCATGAATTAGAAAATAA
CTACTTTTAAACTCCAATGTATCTTAGTCCTAGACTATCATTTTTTCCTA
AATGTTGTGATTTTCCTCTGCTCTAATTCTGCCATTATTTGAACTN

Query= MSMg01no504_l03.g1 MSMg01no504_l03.g1 CHROMAT_FILE:
MSMg01no504_l03.g1 PHD_FILE: MSMg01no504_l03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:22 2005
         (591 letters)



>mm_chr16_62847515_62848506
          Length = 992

 Score = 1104 bits (571), Expect = 0.0
 Identities = 588/595 (98%), Gaps = 4/595 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   actggaccacgatgtcaaggagcaggaaagaaagccaatacatagctctcatgtgcatcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932 actggaccacgatgtcaaggagcaggaaagaaagccaatacatagctctcatgtgcatcc 873

                                                                       
Query: 61  tatttgtgcttaaataaaaccacaaaaaggaggggagggaaggagaggtagagacagaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 tatttgtgcttaaataaaaccacaaaaaggaggggagggaaggagaggtagagacagaga 813

                                                                       
Query: 121 gagatagagaagag---agaattaggaagacctcagtttcatctaaattctcttggcatg 177
           ||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 gagatagagaagagagaagaattaggaagacctcagtttcatctaaattctcttggcatg 753

                                                                       
Query: 178 gttcgatgcgatagaaactcaattatagactggatgaaggaatgggcatccagagcagtg 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 gttcgatgcgatagaaactcaattatagactggatgaaggaatgggcatccagagcagtg 693

                                                                       
Query: 238 ctttgtaaaattgttcacccacaagttacaaagcatggatgggaagactgagtgagcagc 297
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 ctttgtaaaattgttcacccacaagttacaaagcatggatgggaagactgagtgagcagc 633

                                                                       
Query: 298 agccttgttaaactgagtgatagttaacggagacccttcttctcatctgtccttgacttt 357
           |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 632 agccttgttaaactgactgatagttaatggagacccttcttctcatctgtccttgacttt 573

                                                                       
Query: 358 ccatcccaccccatggagaaggagataggtggttacagtgtaacatgtgaggcaagtgac 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ccatcccaccccatggagaaggagataggtggttacagtgtaacatgtgaggcaagtgac 513

                                                                       
Query: 418 tgtaactttaaaacctgacattgcttatcagaaattgccttggactttatctctatctca 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tgtaactttaaaacctgacattgcttatcagaaattgccttggactttatctctatctca 453

                                                                       
Query: 478 gtaatactgtgaaagggtatttttttttt-aaattcccattttacagaagagctacagag 536
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 452 gtaatactgtgaaagggtatttttttttttaaattcccattttacagaagagctacagag 393

                                                                  
Query: 537 attcagagccaggaagctcatgaattagaaaataactacttttaaactccaatgt 591
           |||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 392 attcagagccaggaagctcatgaattagaaaataactactttaaaactccaatgt 338


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 992
Length adjustment: 10
Effective length of query: 581
Effective length of database: 982
Effective search space:   570542
Effective search space used:   570542
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)