Query= MSMg01no506_e22.b1 MSMg01no506_e22.b1 CHROMAT_FILE:
MSMg01no506_e22.b1 PHD_FILE: MSMg01no506_e22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:27 2005
(720 letters)
>mm_chr16_95930688_95931807
Length = 1120
Score = 1332 bits (689), Expect = 0.0
Identities = 710/717 (99%)
Strand = Plus / Plus
Query: 4 ggaattccctccctttcttcaagtggtagatacttcaaaggagctttttattttattcaa 63
|||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccctccctcccttaaagtggtagatacttcaaaggagctttttattttattcaa 263
Query: 64 agataaaaatagcttgttattgttttgatttcccgtttcttcccagccttcgctttttat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agataaaaatagcttgttattgttttgatttcccgtttcttcccagccttcgctttttat 323
Query: 124 ttgaattgcatgacaccaaaaccctgtgtcagctaagatttttcttttcctacacaccca 183
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 324 ttgaattgcatgacaccaaaaccctgtgtcagctcagatttttcttttcctacacaccca 383
Query: 184 atctgacgaaagaggtcttggtcttctctgaagacctctcagtgtggccctatgatcctg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atctgacgaaagaggtcttggtcttctctgaagacctctcagtgtggccctatgatcctg 443
Query: 244 ctgtttttagatgtatttcatttattaagttgattgtgctgataagataatcttccaggc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctgtttttagatgtatttcatttattaagttgattgtgctgataagataatcttccaggc 503
Query: 304 catctggccctatgaggttaattaaagagtgtggagtgagatagaattgtttggattact 363
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 catcaggccctatgaggttaattaaagagtgtggagtgagatagaattgtttggattact 563
Query: 364 ttgaggtcattggcctatgttaccttagaatggctgatgtcatcaggacccatggcaggg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttgaggtcattggcctatgttaccttagaatggctgatgtcatcaggacccatggcaggg 623
Query: 424 ttacttggaccactaagaaagcaccccgtcaagtgagttcacgtggcatttctttttctt 483
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 624 ttacttggaccactaagaaagcacgccgtcaagtgagttcacgtggcatttctttttctt 683
Query: 484 ttccgcagcgccagccagcctttgacaccttcgatggctctctgtttgctgtgctccctt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ttccgcagcgccagccagcctttgacaccttcgatggctctctgtttgctgtgctccctt 743
Query: 544 ctctcagtgaagatcagacactccaagaagtacccacgggcctggattctgtctcccatg 603
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 744 ctctcagtgaagatcagacactccaagaagtgcccacgggcctggattctgtctcccatg 803
Query: 604 gtaatttgtcctccaccctgacagatgcatggcttccctcggcatcgggttaataaagac 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 gtaatttgtcctccaccctgacagatgcatggcttccctcggcatcgggttaataaagac 863
Query: 664 atgatcagttaatagagatagaccattctggttaataaagacatgatcagttaatag 720
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 atgatcagttaatagagatagaccattctggttaataaagacatgatcagttaatag 920
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 720
Length of database: 1120
Length adjustment: 10
Effective length of query: 710
Effective length of database: 1110
Effective search space: 788100
Effective search space used: 788100
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no506_e22.g1 MSMg01no506_e22.g1 CHROMAT_FILE:
MSMg01no506_e22.g1 PHD_FILE: MSMg01no506_e22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:28 2005
(566 letters)
>mm_chr16_96136812_96137771
Length = 960
Score = 953 bits (493), Expect = 0.0
Identities = 535/551 (97%), Gaps = 6/551 (1%)
Strand = Plus / Minus
Query: 16 gtacccgtgcccagatagtttggaattttagggtagttcatatttcaggtgctgaatgaa 75
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 959 gtacctgtgcccagatagtttggaattttagggtagttcatatttcaggtgctgaatgaa 900
Query: 76 attgtggctatgaagtcatagaatgaaacagaagggtctcagggagtagtcaatgagttg 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 899 attgtggctatgaagtcatagaatgaaacagaagggtctcagggagtagtcaatgagttg 840
Query: 136 gctcagcaggtaaaggtgactgctgccaaatctgatgactgaagttcaattcctgggacc 195
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 839 gctcagcaggtaaaggtgactgctgccaagtctgatgactgaagttcaattcctgggacc 780
Query: 196 cacatgtcagaagggaactctgcatggatacacacaaggctgtcactaaactgtaatgag 255
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 779 catatgtcagaagggaactctgcatggatacacacgaggctgtcactaaactgtaatgag 720
Query: 256 atctgtttgtcctttggtttgattatccaaagccaagcttcttgtcaatgctgttgaatt 315
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 719 atctgtttgtcctttggtttgattatccaaaaccaagcttcttgtcaatgctgttgaatt 660
Query: 316 attactatgaaaagttcttaggcaatcctgtaaaacatcagaactaatgaattcagccaa 375
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 659 attactatgaaaagttcttaggcaatcctgtaaaatatcagaactaatgaattcagccaa 600
Query: 376 tttagcatcttatggtcagctgctatgacttgccttcattttgggtcaacaagctgggcc 435
|||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 599 tttagcatcttatggtcagctgctatgacttgcc----ttttggg-caacaagctgggcc 545
Query: 436 actgattgttgataattgggcttctatgtttcccctaagttgaccttgatgatcaaggaa 495
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 544 actgattgttgataattgggcttctatgtttcccctaagttgaccttgatgattaagg-a 486
Query: 496 aaaaaaaatcaaaatcccgaggagacaggcagatctggctgctctgactagtcaggctct 555
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 485 aaaaaaaatcaaaatcccgaggagacaggcagatctggttgctctgactagtcaggctct 426
Query: 556 tttcctccaga 566
||||| ||||
Sbjct: 425 cttccttcaga 415
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 960
Length adjustment: 10
Effective length of query: 556
Effective length of database: 950
Effective search space: 528200
Effective search space used: 528200
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
