Query= MSMg01no506_p10.b1 MSMg01no506_p10.b1 CHROMAT_FILE:
MSMg01no506_p10.b1 PHD_FILE: MSMg01no506_p10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:20 2005
(683 letters)
>mm_chr16_53024784_53025866
Length = 1083
Score = 1139 bits (589), Expect = 0.0
Identities = 644/681 (94%), Gaps = 31/681 (4%)
Strand = Plus / Plus
Query: 1 tcagtattgacagtatagcagaagcaagaggctttgaactagaccaatgtcttattgcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tcagtattgacagtatagcagaagcaagaggctttgaactagaccaatgtcttattgcaa 261
Query: 61 tgaagttttgcaactgaagcaatttgggcaaaagggacacaaggacacatcacagtatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tgaagttttgcaactgaagcaatttgggcaaaagggacacaaggacacatcacagtatcc 321
Query: 121 acaatgatttttttttgttgttgttgttattgttagttaagttggatagttagtaagttt 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 acaatgatttttttt-gttgttgttgttattgttagttaagttggatagttagtaagttt 380
Query: 181 ttgttttgttgtcatagttatagttctcttttgagtgggaagttacaagggtagagaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgttttgttgtcatagttatagttctcttttgagtgggaagttacaagggtagagaaag 440
Query: 241 gttgtgaagggattttgagatgagtggaattggggtacaggatgtgaaattcacaaagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttgtgaagggattttgagatgagtggaattggggtacaggatgtgaaattcacaaagaa 500
Query: 301 tcaataaaaagtttttaaagttttattaattaagttccttcttgaacggaaaacctttta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcaataaaaagtttttaaagttttattaattaagttccttcttgaacggaaaacctttta 560
Query: 361 caaattttcaataccatgttatctactacaaatgacatcacatgaaacactaggaaagct 420
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caaattttcaatagcatgttatctactacaaatgacatcacatgaaacactaggaaagct 620
Query: 421 gctacccacatttaggaaaaactgacttaggaaaatgagttcactggttaggtctgggtg 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gctacccacatttaggaaaaactgacttaggaaaatgagttcactggttaggtctgggtt 680
Query: 481 atttacaaaaaatttattttattttattttattttattttattttattttattttatttt 540
||||||||| || || |||||||||||||||
Sbjct: 681 ttttacaaaacat--at----------------------------attttattttatttt 710
Query: 541 attttattttattttatttttggcttttttcaagacaggaaatccacctgcctctgcctc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 attttattttattttatttttggcttttttcaagacaggaaatccacctgcctctgcctc 770
Query: 601 ccaagtgctgggattaaaggcatgcaccaccacgcctggcataaaatatatttttaacgg 660
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 771 ccaagtgctgggattaaaggcatgtgccaccacgcctggcataaaatatatttttaacgg 830
Query: 661 acattttctcttcattttttt 681
|||||||||||||||||||||
Sbjct: 831 acattttctcttcattttttt 851
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1083
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1073
Effective search space: 722129
Effective search space used: 722129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no506_p10.g1 MSMg01no506_p10.g1 CHROMAT_FILE:
MSMg01no506_p10.g1 PHD_FILE: MSMg01no506_p10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:20 2005
(670 letters)
>mm_chr16_53037409_53038479
Length = 1071
Score = 553 bits (286), Expect = e-161
Identities = 295/298 (98%), Gaps = 1/298 (0%)
Strand = Plus / Minus
Query: 1 ctaagaaccagtgttataatcctctgttaaatacaaatatatcagtggt-aaaaatattg 59
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 493 ctaagaaccagtgttataatcctctgttaaatacaaatatatcagtggtaaaaaatattg 434
Query: 60 tttataaaactttaaggaggataagagagaaacaatcaaaattgattgatatagtccata 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tttataaaactttaaggaggataagagagaaacaatcaaaattgattgatatagtccata 374
Query: 120 aggagttacacagaaaaactttgtagattcactaacatgggttgaaatccagtttactta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 aggagttacacagaaaaactttgtagattcactaacatgggttgaaatccagtttactta 314
Query: 180 aataatgtcagtatttatttttacctcctcattttatgaataatttgcctcctaatttta 239
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 313 aataatgtcagtatttatttttacctcctcattttatgaataatttacctcctaatttta 254
Query: 240 tgttctaattattatctatgttgactgagctgttatctcactgaagtatgtgattttt 297
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tgttctaagtattatctatgttgactgagctgttatctcactgaagtatgtgattttt 196
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1071
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1061
Effective search space: 700260
Effective search space used: 700260
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
