NNNTTATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCCTGATCTTTCCAAGACTTTTATCATGAATGGGTTTAGGAT
TTTGTCAAATGCTTTCTCAGTATCTAACAAGATGATCATGTGGTTTTTGT
CTTTGAGTTTGTTTATATACTGGATTACATTGATGGATTTCCATATATTG
AACCATCCCTGCATCCCTGGGATGAAACCTACTTGGTCAGGATGGATGAT
TGTTTTGATGTGTTCTTGGATTCGGTTAGCTAGAACTTTATTGAGGATTT
TAGCATCGATATTCATAAGGGAAATTGGTCTGAAGTTCTCTATCTTTGTT
GGGTCTTTTTGTGGTTTAGGTATCAGAATAATTGTGGCTTCATAGAATGT
GTTGGGTAGAGTACCTTCCTTTTCTATTTTGTGGAATAGTTTGTGAAGAA
CTGGAATTAGGTCTTCTTTGAAGGTCTGATAGTACTCTCCACTAAACCCA
TCTGGTCCTGGGCTTTTTTTGGTTGGGAGACTATTAATGACTGCTTCTAT
TTCTTTAGGGATATAGGACTGTTGAGATCATTAACCTGATCTTGATTTGG
CTTTGGTACCTGGTATCTGTCTAGAAACGTGTCCATTTCATCCAAGTTTT
CCAGTTTTGTTGAGTATAGCCTTTTGTAGAAAGATCTGATGGTGTTTTTG
ATTTCTTCAGGAACTGNTGNTTTGTTTCTCTTTTCATTTCTGAATATTGT
ATTAAGATGCTTTCCCTGTGCCTCTAN

NNTTTTCCCATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCATGTACTGCTTTACATA
GAACTTTTGTGTATTTCAATTTCTAGAGATATTAACAACAATTTGAAGTA
CAAGGACTATGACAACTCAGAGTGCTTTGTGTTTTGCTTCATATTCTTTA
TCAATATGTCATTATCTATATATGCTCTTTGTAGTACCATTTCATTTGTA
CCATTTCAACTGTAGACTTTTTTCCCATGAAGAATGACATTGAAATATGA
ATGCTGCTTATATTACTTTGAAGACTGCCTTGAATGAGATGGATATTTCA
AAAATTGTATATATTTCATTCTATGATTTTGAAATACTTTTTATTCTTTT
CTATTATTTTGAAGTTCTACTAAAGGAGCCAGTGTTTTCTCTTCTAACAA
TGTAGCATTTTTTAAAAAAATATTCAGGACTTATTGGAAGATCTAAAAAT
GGACTAGTGTAGGAAGCGGCTTCTCTCTGAACTTTATGCTCTGTTCCTCT
TCCTTCTAGCCCTCCTCATTAACTTGAAATCATCAACCAAAGATTGCACA
GACATTAGTGCATAGACTATATCATGGNGTTCTTGATAGTTTTATCTTAA
AACAGTTGTAGGGGTTATTTTACATTTTTTCAAAAGTAAATCATATTAAG
TTTTTTTTTTTGGCCCAAGTGATGAAAAGAGATTGGTCACAATATCTTTA
TGGGGATTCCGTAGATATACATTCCACTGATGAATTAAAATATCTTATCT
TTTA

Query= MSMg01no508_f22.g1 MSMg01no508_f22.g1 CHROMAT_FILE:
MSMg01no508_f22.g1 PHD_FILE: MSMg01no508_f22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:15 2005
         (502 letters)



>mm_chr16_52965358_52966260
          Length = 903

 Score =  919 bits (475), Expect = 0.0
 Identities = 496/503 (98%), Gaps = 1/503 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   catgtactgctttacatagaacttttgtgtatttcaatttctagagatattaacaacaat 60
           |||||| |||||||||||||||| || ||||||||||||||||||||||||||| |||||
Sbjct: 201 catgtattgctttacatagaactattctgtatttcaatttctagagatattaactacaat 260

                                                                       
Query: 61  ttgaagtacaaggactatgacaactcagagtgctttgtgttttgcttcatattctttatc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgaagtacaaggactatgacaactcagagtgctttgtgttttgcttcatattctttatc 320

                                                                       
Query: 121 aatatgtcattatctatatatgctctttgtagtaccatttcatttgtaccatttcaactg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatatgtcattatctatatatgctctttgtagtaccatttcatttgtaccatttcaactg 380

                                                                       
Query: 181 tagacttttttcccatgaagaatgacattgaaatatgaatgctgcttatattactttgaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagacttttttcccatgaagaatgacattgaaatatgaatgctgcttatattactttgaa 440

                                                                       
Query: 241 gactgccttgaatgagatggatatttcaaaaattgtatatatttcattctatgattttga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gactgccttgaatgagatggatatttcaaaaattgtatatatttcattctatgattttga 500

                                                                       
Query: 301 aatactttttattcttttctattattttgaagttctactaaaggagccagtgttttctct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatactttttattcttttctattattttgaagttctactaaaggagccagtgttttctct 560

                                                                       
Query: 361 tctaacaatgtagcatttttt-aaaaaaatattcaggacttattggaagatctaaaaatg 419
           ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 561 tctaacaatgtagcatttttttaaaaaaatattcaggtcttattggaagatctaaaaatg 620

                                                                       
Query: 420 gactagtgtaggaagcggcttctctctgaactttatgctctgttcctcttccttctagcc 479
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gactagtgtaggaagcagcttctctctgaactttatgctctgttcctcttccttctagcc 680

                                  
Query: 480 ctcctcattaacttgaaatcatc 502
           |||||||||||||||||||||||
Sbjct: 681 ctcctcattaacttgaaatcatc 703


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 903
Length adjustment: 10
Effective length of query: 492
Effective length of database: 893
Effective search space:   439356
Effective search space used:   439356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)