Query= MSMg01no509_a01.b1 MSMg01no509_a01.b1 CHROMAT_FILE:
MSMg01no509_a01.b1 PHD_FILE: MSMg01no509_a01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:06 2005
(673 letters)
>mm_chr16_78005909_78006980
Length = 1072
Score = 1011 bits (523), Expect = 0.0
Identities = 619/669 (92%), Gaps = 30/669 (4%)
Strand = Plus / Minus
Query: 5 gaattctttgaatgtctctaaagtagatatcaaaaactgtcagtttgaacaattttcact 64
|||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1040 gaattctttgaatgaatctaaagtacatatcaaaaactgtcagtttgaacaattttcact 981
Query: 65 gcaattttctagaaggaagccatattaacatactaattaatattataagtaattaaaatt 124
|||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 980 gcaattttctaggaggaagccatattaacataataattaacattataagtaattaaaatt 921
Query: 125 gcttaaatttcaggagttactccaaactggtacatatgtatactatcctggggataatac 184
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 920 gcttaaatttcaggagttactccaaactggtacatatgtataccatcctggggataatac 861
Query: 185 taatatcttggaatacatctttattactgaagtattatatgactatatagtaagacaaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 taatatcttggaatacatctttattactgaagtattatatgactatatagtaagacaaaa 801
Query: 245 gaggacttcttaatggggtgtaagcagaatagacaagacaaataattgacatttattaat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 gaggacttcttaatggggtgtaagcagaatagacaagacaaataattgacatttattaat 741
Query: 305 tacaatgaagtttgggcactgtttttttatctcattatttaggcagaagactattctttc 364
|||||||||||| ||| ||||||||||||||||
Sbjct: 740 tacaatgaagtt-------tgt----------------------agaagactattctttc 710
Query: 365 tatttggggagagatattcccaggatgttactgttaattgtttgcggtatctaaaaccta 424
|| |||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||
Sbjct: 709 ta-ttggggagagatattcccaggatgatactgtaaattgtttgaggtatctaaaaccta 651
Query: 425 gatgacagggacagaatcaagcccatccacaatgggcttaaaaagggcgcacagaccata 484
|||||||||||||||||||||||||||||||||||||||||||| || || |||||||||
Sbjct: 650 gatgacagggacagaatcaagcccatccacaatgggcttaaaaaaggtgctcagaccata 591
Query: 485 tgtgattaaatatattatcttcatgactagagcacacaggcaatttgttactttgcatgt 544
||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||
Sbjct: 590 tgtgattaaatatattatcttcacgactggagcacataggcaatttgttactttgcatgt 531
Query: 545 cattgtgacaaaatactagacagaagcaacttaaggaatggttaacctgactcacagttt 604
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 cattgtgacaaaatacttgacagaagcaacttaaggaatggttaacctgactcacagttt 471
Query: 605 cagacagattttagtgcagagtgtcaagagaggcatggaagagttcataacaggagaagc 664
|||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 470 cagagagattttagtgcagagtgtcaagagaggcatggaagagttcatagcaggagaacc 411
Query: 665 atatggaag 673
|||||||||
Sbjct: 410 atatggaag 402
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1072
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1062
Effective search space: 704106
Effective search space used: 704106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no509_a01.g1 MSMg01no509_a01.g1 CHROMAT_FILE:
MSMg01no509_a01.g1 PHD_FILE: MSMg01no509_a01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:06 2005
(563 letters)
>mm_chr16_77855095_77856057
Length = 963
Score = 1081 bits (559), Expect = 0.0
Identities = 562/563 (99%)
Strand = Plus / Plus
Query: 1 aaagaaaggcctatatggtggcttgaataagaatggcccccataggtaggctcatatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaagaaaggcctatatggtggcttgaataagaatggcccccataggtaggctcatatatt 260
Query: 61 tgaatgcttagtcatcttcatcttcaggcatgacactaattaagaaggactaggagatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaatgcttagtcatcttcatcttcaggcatgacactaattaagaaggactaggagatcc 320
Query: 121 ttgctggaggaagtttgtcactataggtggggatatgagcttccaaaagcccaagtcagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgctggaggaagtttgtcactataggtggggatatgagcttccaaaagcccaagtcagg 380
Query: 181 cccagtggctctttcttcctgctttcagtggatctagacatagaactctcagctacatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccagtggctctttcttcctgctttcagtggatctagacatagaactctcagctacatct 440
Query: 241 ccagcatcatgcctactgacctggcaacatactccctgccaagatgataatgactaaact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccagcatcatgcctactgacctggcaacatactccctgccaagatgataatgactaaact 500
Query: 301 gaagcagaaagtgagcatcaattaaatgctttcttttagaagagttgccttagtcatggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaagcagaaagtgagcatcaattaaatgctttcttttagaagagttgccttagtcatggt 560
Query: 361 gcctcttcacaacagaagaatattgacgaagacagcctagaaacagctttataatcattc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcctcttcacaacagaagaatattgacgaagacagcctagaaacagctttataatcattc 620
Query: 421 ctcccattgctgacccacccacccaagtgcagtttgcctatgtttgcaaataactttctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctcccattgctgacccacccacccaagtgcagtttgcctatgtttgcaaataactttctg 680
Query: 481 gttcttttaggattgctagctgagaagaactactattgcaaaatagtccaattggactgt 540
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 681 gttcttttaggattgctagctgagaagaactactattgcgaaatagtccaattggactgt 740
Query: 541 aagacattcacaggacagatctc 563
|||||||||||||||||||||||
Sbjct: 741 aagacattcacaggacagatctc 763
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 963
Length adjustment: 10
Effective length of query: 553
Effective length of database: 953
Effective search space: 527009
Effective search space used: 527009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
