Query= MSMg01no510_g02.b1 MSMg01no510_g02.b1 CHROMAT_FILE:
MSMg01no510_g02.b1 PHD_FILE: MSMg01no510_g02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:39:57 2005
(642 letters)
>mm_chr16_50948301_50949341
Length = 1041
Score = 1145 bits (592), Expect = 0.0
Identities = 613/622 (98%), Gaps = 5/622 (0%)
Strand = Plus / Minus
Query: 21 caagggcataaatcccaggttgagttcccattatccatgagaaccactgcagcttcctag 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1040 caagggcataaatcccaggttgagttcccattatccatgagaaccactgcagcttcctag 981
Query: 81 ttaaatgttttttatttcattttgcttgatcttttggtatattaattggatataattctc 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980 ttaaatgttttttatttcattttgcttgatcttttggtatattaattggatataattctc 921
Query: 141 ataacttacttgctatatttgaagcaaatctaatggagctgtgtgataaattagttttag 200
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 920 ataacttacttgctatatttgaagcaaatccaatggagctgtgtgataaattagttttag 861
Query: 201 aggaaggaaggaaggaaggaaggcctttgagataactaaggttgaagctgaacagtgatg 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 ----aggaaggaaggaaggaaggcctttgagataactaaggttgaagctgaacagtgatg 805
Query: 261 ctcctgactgacctatgaaagagatctgtgagtgtttataaaaccaaaagtgtattttag 320
||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 804 ctcctgactgacctaggaaagaaatctgtgagtgtttataaaaccaaaagtgtattttag 745
Query: 321 acattgacttatggatgtcaatgtgtacaatatcaaatattaataaacatctnggaggtt 380
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 744 acattgacttatggatgtcaatgtgtacaatatcaaatattaataaacatct-ggaggtt 686
Query: 381 aagatgataatagggacagaggttaaggtcagaattcatctgtcatttagtgtgtaccaa 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aagatgataatagggacagaggttaaggtcagaattcatctgtcatttagtgtgtaccaa 626
Query: 441 ttacagcttcatagccagatggatataggaaaagaaaagagtatcattttctgtccttcc 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttacagcttcatagccagatggatataggaaaagaaaagagtatcattttctgtccttcc 566
Query: 501 accaaatgatgcttgttggaaataattgtggaaaaatgcaacaggaaaggaattatgtaa 560
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 565 accaaatgatgcttgttggaaataattgtggaaaaatgcaacaggaaagaaattatgtaa 506
Query: 561 actgaaaaagcagaaatactgtgagacaatttacaacatctgatagctcatggatcatat 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 actgaaaaagcagaaatactgtgagacaatttacaacatctgatagctcatggatcatat 446
Query: 621 tggaaaacatcgggccctcaga 642
||||||||||||||||||||||
Sbjct: 445 tggaaaacatcgggccctcaga 424
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1041
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1031
Effective search space: 651592
Effective search space used: 651592
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no510_g02.g1 MSMg01no510_g02.g1 CHROMAT_FILE:
MSMg01no510_g02.g1 PHD_FILE: MSMg01no510_g02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:39:57 2005
(509 letters)
>mm_chr16_50793083_50793990
Length = 908
Score = 845 bits (437), Expect = 0.0
Identities = 490/509 (96%), Gaps = 4/509 (0%)
Strand = Plus / Plus
Query: 1 gttctttggaatgtgtcaggcagttctgttctgaatgcagtttctccacccttgtaccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gttctttggaatgtgtcaggcagttctgttctgaatgcagtttctccacccttgtaccca 260
Query: 61 cctcctcaagtctgttgtaatacacttctgggtcttctgggttgtttgcatacaagctct 120
|||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 261 cctcctcaagtctgttgtaataca-atctgggtcttctgggttgtttgcataaaagctct 319
Query: 121 ccagagagtaagcaccctgtttttcaggaatgggaaagtggcaaggggagaggaaaggca 180
|||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 320 ccagagagtaagcaccatgtttttcaggaatgggagagtggcaaggggagaggaaaggta 379
Query: 181 acttccaagctgcatggggcttgtgaggaaaggcctagcgttcttgcccttcacacagcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 acttccaagctgcatggggcttgtgaggaaaggcctagcgttcttgcccttcacacagcc 439
Query: 241 tcatttagtgccccttgttttagctgtatacctgactcttccattttattactattgttt 300
||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 440 tcatttagtgcccctcgttttagctgtatacccgactcttccattttcttactattgttt 499
Query: 301 cttctcttgtctgtgtccttccagagtctgtgatgtcctagctatggatcagtggcatct 360
||||||||||||||||| ||||||||||||||| | ||| ||||||||||||||||||||
Sbjct: 500 cttctcttgtctgtgtctttccagagtctgtgaggccctggctatggatcagtggcatct 559
Query: 361 tcccttgcaggacactcaaaaaaatttttttttctgtaaaccaagctagcctcgaactta 420
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcccttgcaggacactcataa---tttttttttctgtaaaccaagctagcctcgaactta 616
Query: 421 atagatctacatgcctctgcctccagagtactgggattaaaggcaatgttttctttaatt 480
| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 617 agagatctacatgcctctgcctccagagtactgggattaaaggcaattttttctttaatt 676
Query: 481 tgacagctttccttggcttattcattact 509
|||||||||||||||||||||||||||||
Sbjct: 677 tgacagctttccttggcttattcattact 705
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 908
Length adjustment: 10
Effective length of query: 499
Effective length of database: 898
Effective search space: 448102
Effective search space used: 448102
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
