Query= MSMg01no511_h06.b1 MSMg01no511_h06.b1 CHROMAT_FILE:
MSMg01no511_h06.b1 PHD_FILE: MSMg01no511_h06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:19 2005
(617 letters)
>mm_chr16_49997173_49998190
Length = 1018
Score = 1133 bits (586), Expect = 0.0
Identities = 608/616 (98%), Gaps = 3/616 (0%)
Strand = Plus / Plus
Query: 5 gaattcacttattgcgaatcatgggacagaatattggacattgagttttgtcgttactat 64
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattcacttagtgggaatcatgggacagaatattggacattgagttttgtcgttactat 262
Query: 65 atttaactcctatttcataaccattttgctctctctgagaagggtggagaattattttaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atttaactcctatttcataaccattttgctctctctgagaagggtggagaattattttaa 322
Query: 125 aatggttcatcgctccatccaattctatcttagttacaggggctacctcgttgtgattta 184
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 323 aatggttcatcgctccatccaattttatcttagttacaggggctacctcgttgtgattta 382
Query: 185 aaaaaatgtttctgctagaacatttcttttccttaaaaaaaaaaaa--gatttgtttact 242
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 383 aaaaaatgtttctgctagaacatttcttttccttaaaaaaaaaaaaaagatttgtttact 442
Query: 243 ttttcattttatatatgggtgcttttctgcatgtacatatgtgtaccacatgtatgcaag 302
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttttcattttatatatgggtgtttttctgcatgtacatatgtgtaccacatgtatgcaag 502
Query: 303 agcctgtggaggccagaagagcttcaaatcctctggaactggaattacagacagtcgtga 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 agcctgtggaggccagaagagcttcaaatcctctggaactggaattacagacagtcgtga 562
Query: 363 gccaccttggaagcactggaaactgaaccttctagtcttgactactggctgtctttccag 422
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 563 gccaccttggaagcactggaaactgacccttctagtcttgactactggctgtctttccag 622
Query: 423 attcccaaacattgcattttcagggcaaaaggtcccatcacagttagcctttggagatct 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 attcccaaacattgcattttcagggcaaaaggtcccatcacagttagcctttggagatct 682
Query: 483 tcctgccttcttcctctgctttttttagattaatttctgctctgata-gggccaggccac 541
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 683 tcctgccttcttcctctgctttttttagattaatttctgctctgatatgggccaggccac 742
Query: 542 gtagcaaaccagccttagccctcagtagctcttgcaatccctgccattctagtacacccc 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gtagcaaaccagccttagccctcagtagctcttgcaatccctgccattctagtacacccc 802
Query: 602 tctttcagcggcatat 617
||||||||||||||||
Sbjct: 803 tctttcagcggcatat 818
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1018
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1008
Effective search space: 611856
Effective search space used: 611856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no511_h06.g1 MSMg01no511_h06.g1 CHROMAT_FILE:
MSMg01no511_h06.g1 PHD_FILE: MSMg01no511_h06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:20 2005
(451 letters)
>mm_chr16_50165269_50166124
Length = 856
Score = 750 bits (388), Expect = 0.0
Identities = 412/422 (97%), Gaps = 5/422 (1%)
Strand = Plus / Minus
Query: 35 cctaggtcctgaaccccagcaaatatcggtgtcactcctgtccatggatctgaccctgca 94
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 cctaggtcctgaacaccagcaaatatcggtgtcactcctgtccatggatctgaccctgca 797
Query: 95 gttgagagcaaaactgaggtgagaggggcaagggagcgtgggtctggttgacgtgagggg 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 gttgagagcaaaactgaggtgagaggggcaagggagcgtgggtctggttgacgtgagggg 737
Query: 155 cgcctgtgggagtggacagtgcggctcaggggagagcgcttacttagcaagaacaaagct 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 cgcctgtgggagtggacagtgcggctcaggggagagcgcttacttagcaagaacaaagct 677
Query: 215 ctcagttcagtctcagtacccagggggaggggcagttctcaccctgcgtttgaatggaac 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 ctcagttcagtctcagtacccagggggaggggcagttctcaccctgcgtttgaatggaac 617
Query: 275 aggtactaaggtgtgcagtttgctgcccaagaagggcctgggagactggaatgggataaa 334
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 aggcactaaggtgtgcagtttgctgcccaagaagggcctgggagactggaatgggataaa 557
Query: 335 --ca---gaagtggcttatacaaaaggttggagaagccaagcaagcctctaccagggtct 389
|| |||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 556 cccattccaagtggcttagacaaaaggttggagaagccaagcaagcctctactagggtct 497
Query: 390 cagttgcaagaacactgagttgagccaaccgaaggacctgagtgaggtgagaccttcaga 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 cagttgcaagaacactgagttgagccaaccgaaggacctgagtgaggtgagaccttcaga 437
Query: 450 tg 451
||
Sbjct: 436 tg 435
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 856
Length adjustment: 10
Effective length of query: 441
Effective length of database: 846
Effective search space: 373086
Effective search space used: 373086
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
