Query= MSMg01no512_e01.b1 MSMg01no512_e01.b1 CHROMAT_FILE:
MSMg01no512_e01.b1 PHD_FILE: MSMg01no512_e01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:21 2005
(537 letters)
>mm_chr16_94552315_94553251
Length = 937
Score = 617 bits (319), Expect = 0.0
Identities = 376/395 (95%)
Strand = Plus / Plus
Query: 1 acactttgtagaggattctgtgagggactgcggcttggtgacccataccaggacttccag 60
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 acactttgtagaggagtctgtgagggactggggcttggtgacccataccaggacttccag 260
Query: 61 caagcagattgaaattggaataagatacaaatctgagaaaagccccaagaccttgttcct 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 caagcagattgaaattggaataagatacaaatctgagaaaagccccaaggccttgttcct 320
Query: 121 tgagcagaggaataactatacccacttgatgcctagacagctgtatcctcccctggatca 180
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 321 tgagcagaggaataactatacccactcgatgcctagacagctgtatcctcccctgggtgg 380
Query: 181 ggggaaaaatagacaaaacaaaacaaaacaatttttcttgagactgggtttctctgtgta 240
|||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 381 gggggggaatagacaaaacaaaacaaaacaattttttttgagacagggtttctctgtgta 440
Query: 241 gttatgtttgtcctggaactcactctgtagaccaggctggccttgaactcacaagatctg 300
|| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 gtcatggttgtcctggaactcactctgtagaccaggctggccttgaactcacaaaatctg 500
Query: 301 cctgtatttgcagggcctaacagtgtgtgccaccatgacttggctgatagaccaaattaa 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctgtatttgcagggcctaaccgtgtgtgccaccatgacttggctgatagaccaaattaa 560
Query: 361 aagaagaaagaaagaaagaaagaaagaaagaaaga 395
||| |||||||||| |||||||| |||||||||||
Sbjct: 561 aaggagaaagaaagtaagaaagagagaaagaaaga 595
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 937
Length adjustment: 10
Effective length of query: 527
Effective length of database: 927
Effective search space: 488529
Effective search space used: 488529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no512_e01.g1 MSMg01no512_e01.g1 CHROMAT_FILE:
MSMg01no512_e01.g1 PHD_FILE: MSMg01no512_e01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:21 2005
(431 letters)
>mm_chr16_94629727_94630555
Length = 829
Score = 822 bits (425), Expect = 0.0
Identities = 429/431 (99%), Gaps = 2/431 (0%)
Strand = Plus / Minus
Query: 1 cactgtaaccgaaagaatcttaggtgaaataccttgtaggtcttctatttgtttttgtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 cactgtaaccgaaagaatcttaggtgaaataccttgtaggtcttctatttgtttttgtaa 570
Query: 61 ctttacatgctgctgaattagatccttgattccctcagggtcatttttacagagtttttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ctttacatgctgctgaattagatccttgattccctcagggtcatttttacagagtttttg 510
Query: 121 agcttttatgtttgcttgcagggcccagtcatattcccccagcatacaaagagcatcaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 agcttttatgtttgcttgcagggcccagtcatattcccccagcatacaaagagcatcaca 450
Query: 181 ataacgataatgaccctgttccaaaaagataaatttaatttttttctcaaaaagtatgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ataacgataatgaccctgttccaaaaagataaatttaatttttttctcaaaaagtatgct 390
Query: 241 taaagcagatagataaggaaaactattttggttgaaatggattagtttaggcctagcaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 taaagcagatagataaggaaaactattttggttgaaatggattagtttaggcctagcaat 330
Query: 301 aaaaaaaaaaaacctaaaatattaatatcctagaaaataaagtggctaacgagctaagta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 --aaaaaaaaaacctaaaatattaatatcctagaaaataaagtggctaacgagctaagta 272
Query: 361 aaaagttataaataggcaagtaatttttaataattaactagaaaccatttttaagagact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 aaaagttataaataggcaagtaatttttaataattaactagaaaccatttttaagagact 212
Query: 421 tttgaaccccc 431
|||||||||||
Sbjct: 211 tttgaaccccc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 829
Length adjustment: 9
Effective length of query: 422
Effective length of database: 820
Effective search space: 346040
Effective search space used: 346040
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
