Query= MSMg01no512_h06.b1 MSMg01no512_h06.b1 CHROMAT_FILE:
MSMg01no512_h06.b1 PHD_FILE: MSMg01no512_h06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:36 2005
(630 letters)
>mm_chr16_84646112_84647138
Length = 1027
Score = 1168 bits (604), Expect = 0.0
Identities = 620/626 (99%), Gaps = 3/626 (0%)
Strand = Plus / Plus
Query: 5 gaattcagtgaggcgagtttatttaacaatccaaaaaaaaaaaaaccctcctcctgtcag 64
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 205 gaattcagtgaggcgagtttatttaacaatccaaaaaaaaaaa--ccctcctcctgtcag 262
Query: 65 ttggccgtgtcaactcataaatacgcttttgatgtagtcctcatagcagttggattttga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ttggccgtgtcaactcataaatacgcttttgatgtagtcctcatagcagttggattttga 322
Query: 125 ataacaacatggtccaagacataccctgagactcataaagcatttctgacacctacgtcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ataacaacatggtccaagacataccctgagactcataaagcatttctgacacctacgtcc 382
Query: 185 aaaacagcagccttcagaagaaaagggaagagtggaggttctaagaaaagggcaggaatt 244
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 383 aaaacagcagccttcagaagaaaagggaagagtgggggttctaagaaaagggcaggaatt 442
Query: 245 cttcccaacgtttagtggtcgagctgagttgctaaattctacgttgcaacagtctatgta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cttcccaacgtttagtggtcgagctgagttgctaaattctacgttgcaacagtctatgta 502
Query: 305 ctttgcatgaaaaaaaaaatacatcgttttattcaccatacaaaaagtccctttgaacac 364
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ctttgcatgaaaaaaaaa-tacatcgttttattcaccatacaaaaagtccctttgaacac 561
Query: 365 actctatttgggggtaattttctgactcaaagagtttgtcttatttccccagggatgctt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 actctatttgggggtaattttctgactcaaagagtttgtcttatttccccagggatgctt 621
Query: 425 taatcatttctctcttttacccactgaagacctcaaagaatccagttatgtgtcacgaat 484
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 622 taatcatttctctcttttacccactgaagacctcaaagaatccagttatgtgtcacaaat 681
Query: 485 gcacatatgcgccagacacattcagagcatacctttcctgctaaagaggtaggagcagaa 544
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gcacatatgcgccagatacattcagagcatacctttcctgctaaagaggtaggagcagaa 741
Query: 545 gaatagagcttttgtaagcagaatgagagcttccccgcgtatttgaggccaggttcttaa 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 gaatagagcttttgtaagcagaatgagagcttccccgcgtatttgaggccaggttcttaa 801
Query: 605 gacaaagtttcacaacaactccttaa 630
||||||||||||||||||||||||||
Sbjct: 802 gacaaagtttcacaacaactccttaa 827
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1027
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1017
Effective search space: 630540
Effective search space used: 630540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no512_h06.g1 MSMg01no512_h06.g1 CHROMAT_FILE:
MSMg01no512_h06.g1 PHD_FILE: MSMg01no512_h06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:36 2005
(562 letters)
>mm_chr16_84818781_84819742
Length = 962
Score = 1033 bits (534), Expect = 0.0
Identities = 555/562 (98%)
Strand = Plus / Minus
Query: 1 aatgctttcttacttgctcttttctccctcgttcttgtcacacactctggagtagcacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 aatgctttcttacttgctcttttctccctcgttcttgtcacacactctggagtagcacac 703
Query: 61 tgtacaggtttagtcattttctgcttagttagtgcaatggaagctccacaatgatgctaa 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 702 tgtacaggtttagtcattttctgcttagttggtgcaatggaagctccacaatgatgctaa 643
Query: 121 ttttgatactgatttccaatacagattttgtgggtgtttgcctcaccttttaaactaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 ttttgatactgatttccaatacagattttgtgggtgtttgcctcaccttttaaactaata 583
Query: 181 tggtggctgcgcctagagcagtgtagggcacgaaactgattacatttcagttaagtgtga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 tggtggctgcgcctagagcagtgtagggcacgaaactgattacatttcagttaagtgtga 523
Query: 241 cagttgctacgtgaaagctcatttgaaaacttagtttagttagtgatacatagaaatgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 522 cagttgctacgtgaaagctcatttgaaaacttagtttagttagtgatacatagcaatgtg 463
Query: 301 tttttaaagttgtactactgaaatgtcctcacagttagagaccatatgtctcctcttgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 tttttaaagttgtactactgaaatgtcctcacagttagagaccatatgtctcctcttgtc 403
Query: 361 attgacaggtaggccccagacagcataagtatgtttttcttgatgaagctgattagcttc 420
||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 402 attgacaggtaggccccagacagcagaagtatgtttttcttgatgaagctaattagcttc 343
Query: 421 tcacaggattactctagacaaataaactacttttgccatttaacagatggttaaaaacta 480
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 tcacagggttactctagacaaataaactacttttgccatttaacagatggttaaaaacta 283
Query: 481 aaagacaggaagaaaaggtaagcattaagaaagaatacttactggaaggaagtttcttct 540
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 aaagacaggaagaaaaagtaagcattaagaaagaatacttactggaaggaagtttcttct 223
Query: 541 gcaaaagaatgggtatatatca 562
|||||||||| |||||||||||
Sbjct: 222 gcaaaagaataggtatatatca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 962
Length adjustment: 10
Effective length of query: 552
Effective length of database: 952
Effective search space: 525504
Effective search space used: 525504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
