Query= MSMg01no513_i19.b1 MSMg01no513_i19.b1 CHROMAT_FILE:
MSMg01no513_i19.b1 PHD_FILE: MSMg01no513_i19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:44:05 2005
(699 letters)
>mm_chr16_53557423_53558525
Length = 1103
Score = 1245 bits (644), Expect = 0.0
Identities = 674/690 (97%), Gaps = 11/690 (1%)
Strand = Plus / Plus
Query: 14 ggaattcttttcacccttccatcatgtagatatgtttaatgactcagaagccatctatgt 73
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 ggaattctttgcacccttccatcatgtagatatgtttaatgactcagaagccatctatgt 273
Query: 74 tcagtcatgtagagtattggagaggctaagctgttgtaaaacatttggaatgtgtgaata 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tcagtcatgtagagtattggagaggctaagctgttgtaaaacatttggaatgtgtgaata 333
Query: 134 gttcaatttccactttatctcccattcttggaaatttgaaggctgaaggtaaaattccaa 193
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gtttaatttccactttatctcccattcttggaaatttgaaggctgaaggtaaaattccaa 393
Query: 194 gtttttattgttcatgaagttgtacg----tttttttttttttgaacctctgtgccaaga 249
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 394 gtttttattgttcatgaagttgtacggttttttttttttttttgaacctctgtgccaaga 453
Query: 250 accaagaatgaataacaaatacatattttttgttatattgacatactgatataagggttg 309
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 454 accaagaatgaataacaaatatatattttttgttatattgacatactgatataagggttg 513
Query: 310 cattttggttaaaggcaaatgatttgcttaaatgaagtaattatatacatgtatcatagt 369
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 514 cattttggttaaaggcaaatgatttgcttacatgaagtaattatatacatgtatcatagt 573
Query: 370 atttcaactaatgtaatgactatcaaatgtaatttatcagcaacaggtgctatatgagta 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 atttcaactaatgtaatgactatcaaatgtaatttatcagcaacaggtgctatatgagta 633
Query: 430 aattataaataaaagattttaatttcatataaaatcaatggtaagtcatgggcttaaggt 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 634 aattataaataaaagattttaatttcatataaaatcaatggtaagtcatgggcttaaagt 693
Query: 490 tgaaagctggaaaactgaaaaagataattttgtgatcaaaaatatttccagttataacag 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 tgaaagctggaaaactgaaaaagataattttgtgatcaaaaatatttccagttataacag 753
Query: 550 aatacccgggtcccagttctgacttgtgaaacaaaaagcatagccgtgctcttaaaatgc 609
||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 aataccc-------agttctgacttgtgaaacaaaaagcatagccgtgctcttaaaatgc 806
Query: 610 aacaagcaaaatctgctgaaaagagtttctagggaccaggcctagttccaagctggcagc 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 aacaagcaaaatctgctgaaaagagtttctagggaccaggcctagttccaagctggcagc 866
Query: 670 agcacatggcactgtcattcacgtggcaaa 699
||||||||||||||||||||||||||||||
Sbjct: 867 agcacatggcactgtcattcacgtggcaaa 896
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 699
Length of database: 1103
Length adjustment: 10
Effective length of query: 689
Effective length of database: 1093
Effective search space: 753077
Effective search space used: 753077
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no513_i19.g1 MSMg01no513_i19.g1 CHROMAT_FILE:
MSMg01no513_i19.g1 PHD_FILE: MSMg01no513_i19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:44:05 2005
(169 letters)
>mm_chr16_53731216_53731786
Length = 571
Score = 288 bits (149), Expect = 1e-82
Identities = 165/171 (96%), Gaps = 2/171 (1%)
Strand = Plus / Minus
Query: 1 ctcatgaaagataagcaaggaaccttttgtggttttcaaactcaaaagtttaagctacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ctcatgaaagataagcaaggaaccttttgtggttttcaaactcaaaagtttaagctacta 312
Query: 61 tctcaataatgcctggaggaaattaatacctgtctaaggaaattcacttatgtt--aaaa 118
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 311 tctcaataatgcctggaggaaattaatacctgtctaaggaaattcacttatgtttaaaaa 252
Query: 119 aaaaaacaactattcttctactgtgttcaaaataagtccatatatatgtgt 169
|||||| |||| |||||||||| |||||||||||||||||||||| |||||
Sbjct: 251 aaaaaaaaactcttcttctactttgttcaaaataagtccatatatttgtgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 169
Length of database: 571
Length adjustment: 8
Effective length of query: 161
Effective length of database: 563
Effective search space: 90643
Effective search space used: 90643
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
