XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
AGCATTAAGTCACTTCAGTCTTTCCTTAAGTTATAACTTTTCTATTAAAA
CCACATTGAAACTATGTGATTTTTAAAAAATTTATGATTATGATTAGCTA
TCTATAGTAATCATCTACCTATTGGGGGTTAATCACATACAAAGTGATGC
GGTCACATAGCAAGAATGTTGAGAAAGGGTAATAAAATAATTTATCTAAA
ATATCAGAGTCTGGGCATCATACACACACACACACACACACACACACACA
CATATATATATATATATATACATATATATGAATGAAACATTTATATATAA
ATTTATGTTATATATTTACATATATAAATACATTTTGAAATCATCTTCAG
GTATATGTTTAAAGCATGGCTTTTCTCATTTAGGTATTACATTGCTGTTA
AGGAGGGCAAGATTGGGGAATAAAAGCAGCTATCCATCGGGTGCAATGTC
TTATTTTGTTTAGGATTTTGTAACAGAATGCTGTAGACTAAATAATAAGT
AACCAGTAGATATTTATTGCTTATAATTTTGAAGCATAGGGAATCTGAAG
ATCACGGGATGAGCAGACCCGCCAGGATGAAGAATGGCTTCCTTGTTTAC
AGTAGCTGCATTTGGCTGGTTCCTTATACATTGAAGAAATATCCTCTGTG
TCTCTATTATGAAAATACTAGTACTAATTGTGAGAN

GCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXACCAATAGCCAGCATCAAACTAAATGGAGAGGAACTTGAAGCAA
TCCCATTAAAATCAGGTACTAGAAAAGGGTAGCCACTTTCTCCCCATTGA
TTCAGTATAGTACTTGGAGTTCTAGCCAGGGCAATTAGACAAAAAATTAA
AAAGGAGTTCAAAGGGATATAAATTGGAAAGGAAGAAGTTAAAATCTCAC
TCTTTGCAAATGATATGACAGTATACTTAAGTGACCCCCAAAATTCCACA
GAGAAATCTTAAACCTGATAAACAACTTTAGCAAAGTGACCATTATAAAA
TTAACTCAAAAAATCAGGAGCCTTCCTATACTTAAAAGATAAACAAGTTG
AGAAAGAAATTAGGGAAACTACAGCCTTCACAATAGTAGTCACAAATAAT
ATAAAATACAGCAGAAAATTCAGCATAGTATTACCTGAGGATCCAGCTAT
ACCACTCTTGGGCATATACCCAAAAGATTCTTCAACATATAACAAGGACA
CATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGG
AAAGAACCCAGATGTCCTTCAACAGAAGAATGGATACAGAAAATGTGGTA
CCTTTACACAATGGAGTACTTACTACTCAGCTATCAAAAACAATGACTTC
ATGATATTCTTAGGCAAATGGGTGGAACTAGAAAATATC

Query= MSMg01no514_c02.b1 MSMg01no514_c02.b1 CHROMAT_FILE:
MSMg01no514_c02.b1 PHD_FILE: MSMg01no514_c02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:44:54 2005
         (692 letters)



>mm_chr16_71940509_71941599
          Length = 1091

 Score =  938 bits (485), Expect = 0.0
 Identities = 618/699 (88%), Gaps = 63/699 (9%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcagcattaagtcacttcagtctttccttaagttataacttttctattaaaaccac 64
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagcattaagtcatttcagtctttccttaagttataacttttctattaaaaccac 264

                                                                       
Query: 65  attgaaactatgtgatttttaaaaaatttatgattatgattagctatctatagtaatcat 124
           ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |
Sbjct: 265 attgaaactatgtgattttt-taaaatttatgattatgattagctatctatagtaatctt 323

                                                                       
Query: 125 ctacctattgggggttaatcacatacaaagtgatgcggtcacatagcaagaatgttgaga 184
           |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 324 ctacctattgggggttaatcacatacaaagtgatgcagtcacatggcaagaatgttgaga 383

                                                                       
Query: 185 aagggtaataaaataatttatctaaaatatcagagtctgggcatcatacacacacacaca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||            
Sbjct: 384 aagggtaataaaataatttatctaaaatatcagagtctgggcatcata------------ 431

                                                                       
Query: 245 cacacacacacacacacatatatatatatatatatacatatatatgaatgaaacatttat 304
                                   |||||||| | ||||||||||||||||| |||||||
Sbjct: 432 ------------------------tatatatacacacatatatatgaatgaagcatttat 467

                                                                       
Query: 305 atataaatttatgttatatatttacatatat----------aaatacattttgaaatcat 354
           |||||||||||||||||||||||||||||||          |||||||||||||||||||
Sbjct: 468 atataaatttatgttatatatttacatatatttatatatataaatacattttgaaatcat 527

                                                                       
Query: 355 cttcaggtatatgtttaaagcatggcttttctcatttaggtattacattgctgttaagga 414
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 528 cttcaggtatatgtttaaagcatggcttttctcatttagatattacattgctgttaagga 587

                                                                       
Query: 415 gggcaagattggggaataaaagcagctatccatcgggtgcaatgtcttattttgtttagg 474
           ||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||     
Sbjct: 588 gggcaagataggg-aataaaagcagctatccattgggtgcaatgtcttattttgt----- 641

                                                                       
Query: 475 attttgtaacagaatgctgtagactaaataataagtaaccagtagatatttattgcttat 534
                  |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 -------aacagaatgctgtagactaaataataagtaaccagtagatatttattgcttat 694

                                                                       
Query: 535 aattttgaagcatagggaatctgaagatcacggga-tgagcagacccgccaggatgaaga 593
           ||||||||||||||||||||| ||| ||||||| | |||| ||||| |||||||||||||
Sbjct: 695 aattttgaagcatagggaatccgaaaatcacgg-actgag-agacctgccaggatgaaga 752

                                                                       
Query: 594 atggcttccttgtttacagtagctgcatttggctggttccttatacattgaagaaatatc 653
           ||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 753 atgacttccttgtttacagtagccgcatttggttggttccttatacattgaagaaatatc 812

                                                  
Query: 654 ctctgtgtctctattatgaaaatactagtactaattgtg 692
           |||||||||||||||||||||| ||||||||||||||||
Sbjct: 813 ctctgtgtctctattatgaaaaaactagtactaattgtg 851


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 692
Length of database: 1091
Length adjustment: 10
Effective length of query: 682
Effective length of database: 1081
Effective search space:   737242
Effective search space used:   737242
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)