XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTAC
TTGTCTCGTCATAGTTTAGGGGCTTGTTATGACTTAGAGAATTGCAAAAT
CCCCTATTTGGTCTGGCTTCTCCCAAAAACTTATTCAATATCACATTACT
CTCCTATAAATATGGTGGTGAAGAAGCCTGGCTCCCTACCCTGGCTTTAG
ATTCCTTGAGCTTTTGTCTCACCCAATCTCTTTGCCTTTTCTCTTGTGTA
TTTAACCACAGCTCCTACACTGCTGGTGTGACATCTGGGCCAGGCCAGGG
AAGGTAAGAATTTTAATACAGCAGCAAATATGGATGGTAATTACATGAGC
AACCAAACAAGCCATAAAGAAACCCTACGGCTGCATACCCTAGCATCCCT
CCAAACTCAGAAATACATGACATAACACGTAAAAGGGCTTTTCCTCAGCT
CCCCCTTTCGATATTTCCCACTGATTTTCAGTCAAAGCAGCTGCTTCCGA
TGTGGTCTAATTCAGGAAAATTGGACTGGTAGATTGGAGCGCTTTTCATA
AATGCATACGGCAGAAGCTCTGAGTCAGCCTTCGACAAGTTTTTCCTTGA
GATACCTGGATTATTGCAAGGCCGTTCTTCGTTTAGAGTTAAGTGTCTAA
ATTTCAAAAGGAGAAGTTCAGAACATGATATTTAAATAAAAGAAATTCTT
TTGACAGCCCAGTTACTGTTGGTGATGGGCTTAATCAGAAATAAN

GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTTTATTTAGCTCTGTACTCCATTTTTTAACAGG
GTAATTTTTTCTCTGGAGTCTAACTTTTTGAGTTCTTTGTATATATTGGA
TATTAGCCCTCATTCAGATGTAGGATTGGTGAAGATCTTTTCCCAGTCTG
TTGATGGCCTTTTTGTCTTCTTGACAGTGTCCTTTATCTTAAAGAAGCTT
TGCAAATTTATGAAATCCCATTTGTCCATTCTTGAACTTACAGTACAAGC
CATTGGTGTTCTGTTCAGGAATTATTCCCTGTGCCTGTATGTTTCAGGTA
TTTCTCCATTTTCTCTTCTATAAATTTCAGTGTATCTAGTTTTATTTAAA
GTTCCTTGATCCACTCGGACTTGAGCTTTGTACAAGAAAGTAAGTATGGG
TTGATTTGCCCTCTTATACATGCTAACCGCCAGTTGAGCCAGCACCATTT
GTTGAAAATGCTGTCTTTTATCCACTGGATGGTTTAATCTCCTTTGTCAA
AGTTCAAATGACCATAGGTGTGTGGGTTCATTTCTGGGTTTTCAATTCTA
TTCCATTGATCTACCTGCCTGTCACTGTACCAATACCATGCAGTTTTTTG
GTTTTGTTTTTTTTTGGTGGTGGTGGTTTTGTTGGTTTTTGGTTTTTTGN
NTGGNTTGGNTGGTTTAAANACAAATGCTCTCTGTAGTAACGTTTTAAGT
CAAGGGATGTTGATTCCTGG

Query= MSMg01no514_m15.b1 MSMg01no514_m15.b1 CHROMAT_FILE:
MSMg01no514_m15.b1 PHD_FILE: MSMg01no514_m15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:49 2005
         (680 letters)



>mm_chr16_28427452_28428531
          Length = 1080

 Score = 1239 bits (641), Expect = 0.0
 Identities = 671/681 (98%), Gaps = 2/681 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   catagtttaggggcttgttatgacttagagaattgcaaaatcccctatttggtctggctt 60
           ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 880 catagtttaggggtttgttatgacttagagaattgcgaaatcccctatttggtctgactt 821

                                                                       
Query: 61  ctcccaaaaacttattcaatatcacattactctcctataaatatggtggtgaagaagcct 120
           ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 820 ctctcaaaaacttattcaatatcacattactctcctataaatatggtggtaaagaagcct 761

                                                                       
Query: 121 ggctccctaccctggctttagattccttgagcttttgtctcacccaatctctttgccttt 180
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 760 ggctccctaccctggctttagattccttgagtttttgtctcacccaatctctttgccttt 701

                                                                       
Query: 181 tctcttgtgtatttaaccacagctcctacactgctggtgtgacatct-gggccaggccag 239
           ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 700 tctcttgtgtatttaaccacagctcctacactgctggtgtgacat-tggggccaggccag 642

                                                                       
Query: 240 ggaaggtaagaattttaatacagcagcaaatatggatggtaattacatgagcaaccaaac 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 ggaaggtaagaattttaatacagcagcaaatatggatggtaattacatgagcaaccaaac 582

                                                                       
Query: 300 aagccataaagaaaccctacggctgcataccctagcatccctccaaactcagaaatacat 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 aagccataaagaaaccctacggctgcataccctagcatccctccaaactcagaaatacat 522

                                                                       
Query: 360 gacataacacgtaaaagggcttttcctcagctccccctttcgatatttcccactgatttt 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gacataacacgtaaaagggcttttcctcagctccccctttcgatatttcccactgatttt 462

                                                                       
Query: 420 cagtcaaagcagctgcttccgatgtggtctaattcaggaaaattggactggtagattgga 479
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 461 cagtcaaagcagctgcttccgatgtggtctaatttaggaaaattggactggtagattgga 402

                                                                       
Query: 480 gcgcttttcataaatgcatacggcagaagctctgagtcagccttcgacaagtttttcctt 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gcgcttttcataaatgcatacggcagaagctctgagtcagccttcgacaagtttttcctt 342

                                                                       
Query: 540 gagatacctggattattgcaaggccgttcttcgtttagagttaagtgtctaaatttcaaa 599
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 341 gagatacctggattattgcaaggcctttcttcgtttagagttaagtgtctaaatttcaaa 282

                                                                       
Query: 600 aggagaagttcagaacatgatatttaaataaaagaaattcttttgacagcccagttactg 659
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 aggagaagttcagaacatgatatttaaataaaagaaattcttttgacagcccagttactg 222

                                
Query: 660 ttggtgatgggcttaatcaga 680
           |||||||||||||||||||||
Sbjct: 221 ttggtgatgggcttaatcaga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1080
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1070
Effective search space:   716900
Effective search space used:   716900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)