Query= MSMg01no515_g17.b1 MSMg01no515_g17.b1 CHROMAT_FILE:
MSMg01no515_g17.b1 PHD_FILE: MSMg01no515_g17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:43 2005
(703 letters)
>mm_chr16_80190252_80191352
Length = 1101
Score = 980 bits (507), Expect = 0.0
Identities = 582/607 (95%), Gaps = 8/607 (1%)
Strand = Plus / Minus
Query: 5 gaattctttacacaattccacttgttcttgcttgtgttgtccatcattagtgagaccatt 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gaattctttacacaagagcacttgttcttgcttgtgttgtccatcattagtgagaccatt 543
Query: 65 agtcaggatcactgattagagtccgtgtagtccattagcgggtctgattctcacaagaaa 124
|||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 542 agtcaggatcactgatta-agtccgtgtagtccattagcgagtctgaatctcacaagaaa 484
Query: 125 caggct-gtttgcaatatggaatacaaaatctggcagtatttgtgaagaatctggaagaa 183
|||||| | ||||||||||| |||||||| |||||||||||| |||||||||||||||||
Sbjct: 483 caggctag-ttgcaatatgg-atacaaaacctggcagtatttttgaagaatctggaagaa 426
Query: 184 ttttatgtgagct-ccttgaaaatagaggagaatatcatctttgaaatacaagcctcgat 242
||||||||| | | ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 425 ttttatgtgcg-tgccttgaaaatagaggagaatatcgtctttgaaatacaagcctcgat 367
Query: 243 tatagagaaaatattgatgtagtcattctgttaccaaggaaactacatttaaagagaaat 302
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tttagagaaaatattgatgtagtcattctgttaccaaggaaactacatttaaagagaaat 307
Query: 303 tgggcttaatacaagtacatgatctagggtgtcacattcaatgtcgaccatggtgttgcc 362
|||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 306 tgggcttaatacaagtacatgatctagggtgtcacattgaatgtcgaccatggtggtgcc 247
Query: 363 agagactagtaaagtgaaactaatagaaacattatgtggagcgtggtggttagttccaat 422
| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 246 aaagactagtaaagtgaaactaatagaaacattatgtggagcatggtggttagttctaat 187
Query: 423 tgtcagcgttgacatacccagg-aatcacctgaaggaaatatttcagtgagggatcgcta 481
||||||| |||||||| ||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 186 tgtcagctttgacata-ccaggcaatcacctgaaggaaatatttcagcgagggatcgcta 128
Query: 482 catcatgatgtccttttgttgtgtctttgggtgattatcttgattcccctaactggtgac 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 catcatgatgtccttttgttgtgtctttgggtgattatcttgattcccctaactggtgac 68
Query: 542 aaaagatgcaggtcactgtaggagacaccataccttgggtagggaatctaagactgtgtt 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 aaaagatgcaggtcactgtaggagacaccataccttgggtagggaatctaagactgtgtt 8
Query: 602 aagatgg 608
|||||||
Sbjct: 7 aagatgg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 703
Length of database: 1101
Length adjustment: 10
Effective length of query: 693
Effective length of database: 1091
Effective search space: 756063
Effective search space used: 756063
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no515_g17.g1 MSMg01no515_g17.g1 CHROMAT_FILE:
MSMg01no515_g17.g1 PHD_FILE: MSMg01no515_g17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:43 2005
(608 letters)
>mm_chr16_80030247_80031254
Length = 1008
Score = 1176 bits (608), Expect = 0.0
Identities = 608/608 (100%)
Strand = Plus / Plus
Query: 1 accttttcatcagagaatgaaagactcacagggccatgtgtattcatttacatgggctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accttttcatcagagaatgaaagactcacagggccatgtgtattcatttacatgggctga 260
Query: 61 atagcagaaatgtttctaaaattagtgagttgtataaaaacgtgtagcaacagtgtcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atagcagaaatgtttctaaaattagtgagttgtataaaaacgtgtagcaacagtgtcttt 320
Query: 121 ttttttttttgcctgcatcctgaatagagcataatttttaacattcatcatgatagtctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttttttttgcctgcatcctgaatagagcataatttttaacattcatcatgatagtctg 380
Query: 181 aagatgctaacagatatcttctggcagaagcagttttatttacttaaaaatctttgtaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagatgctaacagatatcttctggcagaagcagttttatttacttaaaaatctttgtaac 440
Query: 241 tacatactcaggaatttttaattgaactttgctgtctttgaaaaatattcacatatgaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tacatactcaggaatttttaattgaactttgctgtctttgaaaaatattcacatatgaaa 500
Query: 301 gtcatccactttatttaacactgctagtatgggtttatttattttctctctttttatagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtcatccactttatttaacactgctagtatgggtttatttattttctctctttttatagt 560
Query: 361 tccttatgtctttcacaagtgatcagctgacctaagacaataatacgcctatgaactaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tccttatgtctttcacaagtgatcagctgacctaagacaataatacgcctatgaactaaa 620
Query: 421 ttaatgatatcacagagtcagaaattaaagcacgtttttgtagtcataaaaaataaagga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttaatgatatcacagagtcagaaattaaagcacgtttttgtagtcataaaaaataaagga 680
Query: 481 aaaaatggaaaatataaagatgatttgtttcaaggatatgtatgtctctgaacagattat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaaaatggaaaatataaagatgatttgtttcaaggatatgtatgtctctgaacagattat 740
Query: 541 ctacctgtcccaaatatctttcttgtgtcccttcaataattttgttgccactatgttagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctacctgtcccaaatatctttcttgtgtcccttcaataattttgttgccactatgttagt 800
Query: 601 ttttctct 608
||||||||
Sbjct: 801 ttttctct 808
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space: 596804
Effective search space used: 596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
