NNNNNCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTTAACAGAGAAATCTCAGTTCGCTGACAAGCACTTAAAG
AAATGTTCAAGGAAATGCAAATCAAAATGACTCTCAGATTCCACCTTATA
CCCATCCAAATGGTTAAGATCAAAACTTCAAGGGACAGCACAAGGGGGCA
AGTATGTGGAGCAAAGGAACTCTCTTCCATTGCTGGTGGGAGTACAAACT
CTCACAAGTACTCTGGAAATCAATTTGGTAGTTTCTCAGAAGACTGAGAA
TAGCTCTTCCTCAAGACCCTGCTATACCTCTCTTGGGCACATATCCAAAA
GATGCTCCACCATCCCTCTAGGACATTTGCTCAATTATGTTTGTATGTTT
ATTCATAATACCCTGAAGCTATTACATTGTTTACAACTGAAAACAACCTA
GATATGTATGCCTCAACTGAAGAATGGATAAAAAAATGTGATTCATTTAC
ACAATGGAATACTACTCAGCTATTAAAAACAAGGACATCATAAATTCTGC
AGGCAAATAGATGGAACTAGAAAATTTCATCCTGAGTGATGTAACCCAGA
CCCAAAAGGATATGCATAGTATGTACTCACTTATAAATGGATATTAGCTG
TAAACCATGCTATAACCAACATGGGAATTCATGCTATAATTAACAGACCC
AAAAGAGCCATATAGCAAGGAGAATCCAAGGGGAGGGTGGTTGAATCTTT
TAGTGGAAATAAATAGATATTA

NNNNCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAACAAACATATGGGACGTCC
ATGGTGCAATTGTTCATTATGTCTACATGCATTATAAAACTTACATCATT
TTAAGATATTCTAAAGGATTCCATGTTTTACAAAAAAAAAAAAGTAGGGA
GATGGCAAAAAGAAACAAAAGATAAATTCATGTCATTCCAGTATTCTTTT
GCGTTATCTTGAGGAATTTCCTTGAGTGTTCCTTATACTGCTGATCTATA
CACTTGTTTTCTTGTAACTGGAAATGAATTTTCCCTTCATTCTTGAGTGA
TAATACAGATATATGAGTTTGTATTGACAGTTTTCTTTGTGTAACTGTTT
TATTCCAGTCTTCATGATTTCACATAAAAATTATGTATTTGTTTCCCCTT
ATGTTACACATGATGTTTTCTCAAAACTTATTATATTTGCTCTTTATTTT
CTAATTTAACAGTCTGATTGTTATGCATCTTAGCTGTACAGCCCGTGCTT
CAATTTTTTATTTTCTTCTAATATCTTTTGTCTTCAGGTCTCACAGTTTT
ATCAGTTATGAATGTTTTTTAGTTTTAATTTTAACATATTTTCTCTCTCA
TTTTTCTCTCCTTCAAGTGCCAAAAATGCATCTGACCAGAAAGTATAATC
TGAGAGTAAATTATGCAGATTACATAGGACATGTATATTGCTGACCATGT
GTTTTGTTATATTTTTA

Query= MSMg01no516_n20.g1 MSMg01no516_n20.g1 CHROMAT_FILE:
MSMg01no516_n20.g1 PHD_FILE: MSMg01no516_n20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:45 2005
         (579 letters)



>mm_chr16_51826330_51827309
          Length = 980

 Score = 1023 bits (529), Expect = 0.0
 Identities = 570/589 (96%), Gaps = 10/589 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   taacaaacatatgggacgtccatggtgcaattgttcattatgtctacatgcattataaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 taacaaacatatgggacgtccatggtgcaattgttcattatgtctacatgcattataaaa 251

                                                                       
Query: 61  cttacatcattttaagatattctaaaggattccatgttttacaaaaaaaaaaaagtaggg 120
           |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 252 cttacatcattttaagatatcctataggattccatgttttacaaaaaaaaaaaagtaggg 311

                                                                       
Query: 121 agatggcaaaaagaaacaaaagataaattcatgtcattccagtattcttttgcgttatct 180
           |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 312 agatggcaaaaagaaacaaaagataaatgcatgtcattccagtatccttttgcgttatct 371

                                                                       
Query: 181 tgaggaatttccttgagtgttccttatactgctgatctatacacttgttttcttgtaact 240
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 372 tgaggaatttccttgagtgttccttatactgctgatctatacactcgttttcttgtaact 431

                                                                       
Query: 241 ggaaatgaattttcccttcattcttgagtgataatacagatatatgagtttgtattgaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ggaaatgaattttcccttcattcttgagtgataatacagatatatgagtttgtattgaca 491

                                                                       
Query: 301 gttttctttgtgtaactgtttta---------ttccagtcttcatgatttcacataaaaa 351
           ||||||||||||||||| |||||         |||||| |||||||||||||||||||||
Sbjct: 492 gttttctttgtgtaactattttaactggattattccagacttcatgatttcacataaaaa 551

                                                                       
Query: 352 ttatgtatttgtttccccttatgttacacatgatgttttctcaaaacttattatatttgc 411
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 552 ttatgtatttgtttccccttatgttacacatgatgttttctcacaacttattatatttgc 611

                                                                       
Query: 412 tctttattttctaatttaacagtctgattgttatgcatcttagctgtacagcccgtgctt 471
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 612 tctttattttctaatttaacagtctgattgttatgcatcttagctgtacagcctgtgctt 671

                                                                       
Query: 472 caattttttattttcttctaatatcttttgtcttcaggtctcacagttttatcagttatg 531
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 caattttttattttcttctaatatcttttgtcttcaggtctcacagttttatcagttatg 731

                                                            
Query: 532 aatgttttttagttttaatttt-aacatattttctctctcatttttctc 579
           |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 732 aatgttttttagttttaatttttaacatattttctctctcatttttctc 780


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 980
Length adjustment: 10
Effective length of query: 569
Effective length of database: 970
Effective search space:   551930
Effective search space used:   551930
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)