Query= MSMg01no517_p22.b1 MSMg01no517_p22.b1 CHROMAT_FILE:
MSMg01no517_p22.b1 PHD_FILE: MSMg01no517_p22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:16 2005
(570 letters)
>mm_chr16_26932237_26933206
Length = 970
Score = 542 bits (280), Expect = e-158
Identities = 292/296 (98%)
Strand = Plus / Minus
Query: 7 gaattcaaaatggttactttgtgattggtacaaattgaagtggatttttttgtgtgagag 66
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 502 gaattcaaaatggttactttgtgattggtacaaattgaagtggatttttgtgtgtgagaa 443
Query: 67 taatggacttcattataagcaaccctatttaatttcaaaatgtagagctaatttggacta 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 taatggacttcattataagcaaccctatttaatttcaaaatgtagagctaatttggacta 383
Query: 127 atcataacctggagctatatttatctcaaatgtaagacttgtaatcactagaaaatcaac 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 atcataacctggagctatatttatctcaaatgtaagacttgtaatcactagaaaatcaac 323
Query: 187 taactgactaacagcctcatcttctcagctagcctaactaacaatatattggctagtctc 246
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 322 taactgactaacagcctcatcttctcagctagcctaactaacaatatattgcctagtctc 263
Query: 247 aactattgggcacagatttcactgcattggaaagtgttcacttccaggacacaaag 302
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 262 aactattgggcacagatttcactgcattggaaagtgttcacttccaggacaaaaag 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 970
Length adjustment: 10
Effective length of query: 560
Effective length of database: 960
Effective search space: 537600
Effective search space used: 537600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no517_p22.g1 MSMg01no517_p22.g1 CHROMAT_FILE:
MSMg01no517_p22.g1 PHD_FILE: MSMg01no517_p22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:16 2005
(487 letters)
>mm_chr16_26822793_26823678
Length = 886
Score = 934 bits (483), Expect = 0.0
Identities = 486/487 (99%), Gaps = 1/487 (0%)
Strand = Plus / Plus
Query: 1 aaataaaggctgtgtcctcaaattttctcccaggtaacaggtgcaatttcacatttgcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaataaaggctgtgtcctcaaattttctcccaggtaacaggtgcaatttcacatttgcca 260
Query: 61 agaaaatgcctctgtactgtgggctggaacgttgctgtcatgggaatgaacctctttcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaaaatgcctctgtactgtgggctggaacgttgctgtcatgggaatgaacctctttcag 320
Query: 121 aactgcttggatgataaagcttgtgtagaggattaggagaacattaaaatgaggagtaaa 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aactgcttggatgataaa-cttgtgtagaggattaggagaacattaaaatgaggagtaaa 379
Query: 181 tgaagtaggaggtacttctactaaactactactgaacagtgtttaaaacaatactgtaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgaagtaggaggtacttctactaaactactactgaacagtgtttaaaacaatactgtaag 439
Query: 241 catctcttgattcacacatttccttctagtgactgcagttttccctgcttggttgtatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 catctcttgattcacacatttccttctagtgactgcagttttccctgcttggttgtatat 499
Query: 301 actacattagctatccgagataccactgttatttttaaatgaatttatttgaaaatttga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 actacattagctatccgagataccactgttatttttaaatgaatttatttgaaaatttga 559
Query: 361 aacatggtaaaatgtatttcttttgactgaaatactattcagtacatatgaaaaacttta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aacatggtaaaatgtatttcttttgactgaaatactattcagtacatatgaaaaacttta 619
Query: 421 tcatagcaaagtataattgcttacaggctggagagataactcagtgggtaagaatgtttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tcatagcaaagtataattgcttacaggctggagagataactcagtgggtaagaatgtttg 679
Query: 481 ctagaca 487
|||||||
Sbjct: 680 ctagaca 686
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 886
Length adjustment: 10
Effective length of query: 477
Effective length of database: 876
Effective search space: 417852
Effective search space used: 417852
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
