Query= MSMg01no518_f10.b1 MSMg01no518_f10.b1 CHROMAT_FILE:
MSMg01no518_f10.b1 PHD_FILE: MSMg01no518_f10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:43 2005
(621 letters)
>mm_chr16_92673136_92674158
Length = 1023
Score = 1110 bits (574), Expect = 0.0
Identities = 610/624 (97%), Gaps = 6/624 (0%)
Strand = Plus / Minus
Query: 4 ggaattcctcgtatcgacacattaaaggatgaccataaagtcataggaaccatggtgctg 63
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 ggaattcctcgtattgacacattaaaggatgaccataaagtcataggaaccatggtgctg 600
Query: 64 agcagtggccataccag-tcggggtcacagctgtatttctttcctaagtcagctagtctc 122
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 agcagtggccataccagttgggggtcacagctgtatttctttcctaagtcagctagtctc 540
Query: 123 tggctaagccgacactctcacagtcttacaccttctggaagcgccagtcagctccaggag 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 tggctaagccgacactctcacagtcttacaccttctggaagcgccagtcagctccaggag 480
Query: 183 agactgccgctgagtcctgaacttgttcgtaggcagctgcctagaacagcttgcacatta 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 agactgccgctgagtcctgaacttgttcgtaggcagctgcctagaacagcttgcacatta 420
Query: 243 gagtcacaggggcaattttcactttggaggatggtagttgggcagtgggtgggagatggg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gagtcacaggggcaattttcactttggaggatggtagttgggcagtgggtgggagatggg 360
Query: 303 gtgagtggaggctcctgagtttagattttgcacaggtggccatttatacaccaatggtgg 362
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 359 gtgagtggaggctcctgagtttagattttgcacaggtggccatttatacgccaatggtgg 300
Query: 363 aagcacaaag-ttgggagtgtaaagtttagggtcattccctctgtggttaagtgaggtgg 421
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 aagcacaaaggttgtgagtgtaaagtttagggtcattccctctgtggttaagtgaggtgg 240
Query: 422 ttaatattttatgactgtttgtctgtctgtctgtattatgtatttgtgtgtgtgt----t 477
||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |
Sbjct: 239 ttaatattttatgtctgtctgtctgtctgtctgtattatgtatttgtgtgtgtgtgtgtt 180
Query: 478 gtggcttatctatggaggttcaaggataacttgtgtgagtcagttctgtccttccactat 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 gtggcttatctatggaggttcaaggataacttgtgtgagtcagttctgtccttccactat 120
Query: 538 ttggatcccaagagtgaaacttgggttgtccagtttggcagcaagtccctctgcccactg 597
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 119 ttggatcccaagagtgaaacttgggttgtcccgtttggcagtaagtccctctgcccactg 60
Query: 598 agccatcttgccaacctgagctga 621
||||||||||||||||||||||||
Sbjct: 59 agccatcttgccaacctgagctga 36
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1023
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1013
Effective search space: 618943
Effective search space used: 618943
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no518_f10.g1 MSMg01no518_f10.g1 CHROMAT_FILE:
MSMg01no518_f10.g1 PHD_FILE: MSMg01no518_f10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:43 2005
(361 letters)
>mm_chr16_92493201_92493961
Length = 761
Score = 574 bits (297), Expect = e-168
Identities = 335/351 (95%), Gaps = 8/351 (2%)
Strand = Plus / Plus
Query: 1 attcagaacttctgattagccaactttacaatccctgctttctagtttaagtgtgttctg 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcagaacttctgattacccaactttacaatccctgctttctagtttaagtgtgttctg 260
Query: 61 tgctgatattcactacacctgctggttctggggatgagcctatggtgtaaacacactagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgctgatattcactacacctgctggttctggggatgagcctatggtgtaaacacactagc 320
Query: 121 gctgagccaaattcccccactgagcaaaacctagcagagagagaagtgatcttggagcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctgagccaaattcccccactgagcaaaacctagcagagagagaagtgatcttggagcca 380
Query: 181 tttgtaggagaggaaaacttgaa-gaaatcataaggtggactttagctcagccatgagca 239
||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 381 tttgtaggagaggaaaacttgaaagaaatcacaaggtggactttagctcagccatgagca 440
Query: 240 aattcaccctatggttaaatgttacagatacaacgagagtgaaaggtttcgtgtgtgtgt 299
|||||||||||| | | |||| |||||| |||| ||||||||||||||||||||||||||
Sbjct: 441 aattcaccctatagctgaatgctacaga-acaatgagagtgaaaggtttcgtgtgtgtgt 499
Query: 300 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagagagagag 350
|||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 500 gtgtgtgtgtgtgtatgtgtgtgtgtgtg------agagagagagagagag 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 52
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 361
Length of database: 761
Length adjustment: 9
Effective length of query: 352
Effective length of database: 752
Effective search space: 264704
Effective search space used: 264704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
