Query= MSMg01no519_a10.b1 MSMg01no519_a10.b1 CHROMAT_FILE:
MSMg01no519_a10.b1 PHD_FILE: MSMg01no519_a10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:37 2005
(507 letters)
>mm_chr16_97948606_97949513
Length = 908
Score = 953 bits (493), Expect = 0.0
Identities = 502/505 (99%), Gaps = 1/505 (0%)
Strand = Plus / Plus
Query: 4 ggaattcaaggttttctgctgctacattgtaagttcaaggctagcctggtctatatgaga 63
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaaggtcatctgctgctacattgtaagttcaaggctagcctggtctatatgaga 263
Query: 64 ccctttttttttttttttaaagaaacctataaatatggtctaccacatgttcttgttgct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ccctttttttttttttttaaagaaacctataaatatggtctaccacatgttcttgttgct 323
Query: 124 ttgggtttcttgagatagggtctttctacgtagcccttgttactcaccatagctactcac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttgggtttcttgagatagggtctttctacgtagcccttgttactcaccatagctactcac 383
Query: 184 tatgtagactaggctggcctggagctcacagagatccatctgcctctgtctcctgagtgc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tatgtagactaggctggcctggagctcacagagatccatctgcctctgtctcctgagtgc 443
Query: 244 tgagattaaaggtgtgtgccaccaagcctggccccaccacatattctttattttgcaaaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgagattaaaggtgtgtgccaccaagcctggccccaccacatattctttattttgcaaaa 503
Query: 304 gaaaccatgagcaagctcaacgtcctggaaacattgcctaagttttcaccactgtccagg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gaaaccatgagcaagctcaacgtcctggaaacattgcctaagttttcaccactgtccagg 563
Query: 364 tacttcccacaggggagtgtgtaggtggtacaatatggccccttgccctgggcaagagtt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tacttcccacaggggagtgtgtaggtggtacaatatggccccttgccctgggcaagagtt 623
Query: 424 gaaagaatgttt-cccctcccccatacttggcaacttgactccatgttttagtctactag 482
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gaaagaatgttttcccctcccccatacttggcaacttgactccatgttttagtctactag 683
Query: 483 ggcagtgttgacaaacagttacaga 507
|||||||||||||||||||||||||
Sbjct: 684 ggcagtgttgacaaacagttacaga 708
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 908
Length adjustment: 10
Effective length of query: 497
Effective length of database: 898
Effective search space: 446306
Effective search space used: 446306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no519_a10.g1 MSMg01no519_a10.g1 CHROMAT_FILE:
MSMg01no519_a10.g1 PHD_FILE: MSMg01no519_a10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:37 2005
(664 letters)
>mm_chr16_98118198_98119261
Length = 1064
Score = 1191 bits (616), Expect = 0.0
Identities = 616/616 (100%)
Strand = Plus / Minus
Query: 1 acctgggagacattcccaaataaatctgcttttatacttttaatttgacttgaattaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 acctgggagacattcccaaataaatctgcttttatacttttaatttgacttgaattaact 557
Query: 61 tatttctatcagcagagaaaacctattagaagctacccttttttatctgggggtatccta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tatttctatcagcagagaaaacctattagaagctacccttttttatctgggggtatccta 497
Query: 121 gacacatgcttatgtgcctaccacagccaccttgctcatttttgttcttgaaaaggacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gacacatgcttatgtgcctaccacagccaccttgctcatttttgttcttgaaaaggacag 437
Query: 181 tatttattgggaattatagtcagccttctgttctgaaatggtggcctcacttaggattct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tatttattgggaattatagtcagccttctgttctgaaatggtggcctcacttaggattct 377
Query: 241 gtgggtgatttggggagaaaagatctcaggactcaggcaggtctgtggctgaggtttttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gtgggtgatttggggagaaaagatctcaggactcaggcaggtctgtggctgaggtttttt 317
Query: 301 gtttgattttggtttttgttttttaatctagtaaattcattcctgggaggcaagtgccag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gtttgattttggtttttgttttttaatctagtaaattcattcctgggaggcaagtgccag 257
Query: 361 cttgatagtatatactaatgatacttaacctttcagaaaagccactgcttgacttggggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 cttgatagtatatactaatgatacttaacctttcagaaaagccactgcttgacttggggg 197
Query: 421 agagttgttgacaaagtgtttgccttgcaagtatgaggacctgagttccatcccagaatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 agagttgttgacaaagtgtttgccttgcaagtatgaggacctgagttccatcccagaatt 137
Query: 481 catgtttaaaaataaatgctggacatggtggcatgtgcttgtaattccagtgctgaggag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 catgtttaaaaataaatgctggacatggtggcatgtgcttgtaattccagtgctgaggag 77
Query: 541 atggagacaggcaggcttctagagtctgccatgcaaacatgaggacttgagtttagatcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 atggagacaggcaggcttctagagtctgccatgcaaacatgaggacttgagtttagatcc 17
Query: 601 ccagaaccaacttaag 616
||||||||||||||||
Sbjct: 16 ccagaaccaacttaag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space: 689316
Effective search space used: 689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
