Query= MSMg01no519_b09.b1 MSMg01no519_b09.b1 CHROMAT_FILE:
MSMg01no519_b09.b1 PHD_FILE: MSMg01no519_b09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:42 2005
(591 letters)
>mm_chr16_69197062_69198053
Length = 992
Score = 1006 bits (520), Expect = 0.0
Identities = 572/590 (96%), Gaps = 3/590 (0%)
Strand = Plus / Plus
Query: 5 gaattcacaaatgatgcaaatatgcagaaagcaagctccagaat--gaaatggggttata 62
|||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 203 gaattcacaaatgatgcaaatatgcagaaaacaagctccagaattacaaatggggttata 262
Query: 63 tgagtttgtacgaaatgaaatatccaagggggaaatttgaacatttctggaaattgggca 122
|| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 263 tgggtttgtatgaaatgaaatatccatgggggaaatttgaacatttctggaaattgggca 322
Query: 123 gaggctcagtaaaacccaatagtgctagggtggcattgaatagaaatctataaacttagc 182
|||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 323 gaggctcagtaaaacccaatagagctagggaggcattgaatagaaatctataaacttagc 382
Query: 183 atttactggattccaaacattgcttccacaactgcagttccaataagttcagcatagaaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atttactggattccaaacattgcttccacaactgcagttccaataagttcagcatagaaa 442
Query: 243 cattataaaatgtatcatcaggtcaaaagtactcagcattttttattaaaaaacaaacaa 302
|||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 443 cattataacatatatcatcaggtcaaaggtactcagcattttttattaaaaaacaaacaa 502
Query: 303 aaacaaaaacaaaacacaaaaactctagtcaatacaaatatttatccatatagtaggtaa 362
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 503 aaacaaaaacaaaacacaaaaactctagtcaatacaaatatttatccatataataggtaa 562
Query: 363 atttcaaatgaaaagaacatcctaagattttttttt-agattactcaatgattaaaaatg 421
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 563 atttcaaatgaaaagaacttcctaagattttttttttagattactcaatgattaaaaatg 622
Query: 422 gagaggggagagagacataaaggacatatcaacacaagtattggaagtacatatagaatt 481
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 623 gagaggggagagagacataaaggacatatcaacagaagtattggaagtacatatagaatt 682
Query: 482 gtattattcaaattaggaaagagcactaaaatattatatacagtaaatggtaagtacaat 541
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 683 gtattattcaaattaggaaagagcactaaaatattagatacagtaaatggtaagtacaat 742
Query: 542 atacaaatagcattctttaagcacagaggaaagctaaaaacacggaagag 591
||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 743 atacaaatagcattctttaagcacagaggaaagctaaaaacacagaagag 792
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 992
Length adjustment: 10
Effective length of query: 581
Effective length of database: 982
Effective search space: 570542
Effective search space used: 570542
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no519_b09.g1 MSMg01no519_b09.g1 CHROMAT_FILE:
MSMg01no519_b09.g1 PHD_FILE: MSMg01no519_b09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:42 2005
(572 letters)
>mm_chr16_69352084_69353055
Length = 972
Score = 772 bits (399), Expect = 0.0
Identities = 399/399 (100%)
Strand = Plus / Minus
Query: 174 gtgcggagctagagcccaaggtctgcttagggcatgggatcaaaccagaaagttatttat 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 972 gtgcggagctagagcccaaggtctgcttagggcatgggatcaaaccagaaagttatttat 913
Query: 234 ttacatttcaaatgttatcccctttcctcgtttcctctccagaaacctcatatcccattc 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 912 ttacatttcaaatgttatcccctttcctcgtttcctctccagaaacctcatatcccattc 853
Query: 294 cccttccctctgcttctatgatggtgtgccccatacccacccactccttcccataattcc 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 cccttccctctgcttctatgatggtgtgccccatacccacccactccttcccataattcc 793
Query: 354 cctaaactagggcatcaagctgcttctatactatttgtacagttagtttttaaatatgtg 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 cctaaactagggcatcaagctgcttctatactatttgtacagttagtttttaaatatgtg 733
Query: 414 tatgaaaattttataaatgagtaatgtgttttcatataaatacatatttgtacagaacat 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 tatgaaaattttataaatgagtaatgtgttttcatataaatacatatttgtacagaacat 673
Query: 474 ctgtctttattatataaatttgttgtgttctaattttttatggcaaagacgttggtataa 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ctgtctttattatataaatttgttgtgttctaattttttatggcaaagacgttggtataa 613
Query: 534 gacagataatcataaacattatatcatgaaaatgtacta 572
|||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gacagataatcataaacattatatcatgaaaatgtacta 574
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space: 540644
Effective search space used: 540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
