Query= MSMg01no519_e22.b1 MSMg01no519_e22.b1 CHROMAT_FILE:
MSMg01no519_e22.b1 PHD_FILE: MSMg01no519_e22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:59 2005
(644 letters)
>mm_chr16_83609632_83610675
Length = 1044
Score = 576 bits (298), Expect = e-168
Identities = 310/314 (98%)
Strand = Plus / Minus
Query: 4 ggaattccttgatcatattacattgctttgcttccagtgcattgttcagtgtagtgttca 63
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ggaattccttgaacatattacattgctttgcttccagtgcattgttcagtgtagtgttca 255
Query: 64 aatagatccattaaatgtcaagactgacagggattgaatttcctggttgtgtgttggacc 123
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 aatagatccattaagtgtcaagactgacagggattgaatttcctggttgtgtgttggacc 195
Query: 124 atgaaaggcagtctgtgtactggtcaagggaggcttactccggagacccagtagaaaata 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 gtgaaaggcagtctgtgtactggtcaagggaggcttactccggagacccagtagaaaata 135
Query: 184 caagggacggaaccataagctatgcccccagacacaggcgcctgacaccacaagccctca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 caagggacggaaccataagctatgcccccagacacaggcgcctgacaccacaagccctca 75
Query: 244 actctattgttctgtggccatcagtcacataagctgtctggactccacccccacagattc 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 74 actctattgttctgtggccatcagtcacataagctgtctggactccacccccacagtttc 15
Query: 304 ctggcaatagccaa 317
||||||||||||||
Sbjct: 14 ctggcaatagccaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no519_e22.g1 MSMg01no519_e22.g1 CHROMAT_FILE:
MSMg01no519_e22.g1 PHD_FILE: MSMg01no519_e22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:59 2005
(549 letters)
>mm_chr16_83421275_83422223
Length = 949
Score = 982 bits (508), Expect = 0.0
Identities = 545/570 (95%), Gaps = 21/570 (3%)
Strand = Plus / Plus
Query: 1 tttctaagtttgtgccttgattttcatatttgtagatgagtttattgtattttgattttt 60
||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 tttctaagtttatgccttgattttcatatttatagatgagtttattgtattttgattttt 260
Query: 61 gtttgattttctttggtcacataaatgctttattccacacaccatctttttctactctat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtttgattttctttggtcacataaatgctttattccacacaccatctttttctactctat 320
Query: 121 atgttaccggaaataccaccgggagtgctcactctaaggtgtcacattttacagagtaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgttaccggaaataccaccgggagtgctcactctaaggtgtcacattttacagagtaac 380
Query: 181 ccagcacactccttggggttcttaaatttataaataaaatactttaaaaatgaaacaaga 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccagcacactctttggggttcttaaatttataaataaaatactttaaaaatgaaacaaga 440
Query: 241 agaaagattgagggcgattttattagactatgaaagaaaaaccccaggcaggcagtctta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaaagattgagggcgattttattagactatgaaagaaaaaccccaggcaggcagtctta 500
Query: 301 atgtcttcatagcagcagtgaggggtgagatggaagagaagagaaaaaaaagctatgcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgtcttcatagcagcagtgaggggtgagatggaagagaagagaaaaaaaagctatgcat 560
Query: 361 tttgagtttgtcatgaatgccaacaagcaaccagaaaaagagagtcacagcagcctgaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttgagtttgtcatgaatgccaacaagcaaccagaaaaagagagtcacagcagcctgaca 620
Query: 421 aaggcttggaaaggcttgagaggaaatgagaaagcccgaaacattatggaaaccatacct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaggcttggaaaggcttgagaggaaatgagaaagcccgaaacattatggaaaccatacct 680
Query: 481 aggcttaggcttgggagatttctgaaagaaag-------------------taaaaggaa 521
|||||||||||||||||||||||||||||||| |||||||||
Sbjct: 681 aggcttaggcttgggagatttctgaaagaaagaaaattgagtttaagaaagtaaaaggaa 740
Query: 522 aaaaaaaaac--caagataatcttttccca 549
||||||||| ||||||||||||||||||
Sbjct: 741 aaaaaaaaaaaacaagataatcttttccca 770
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space: 506121
Effective search space used: 506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
