Query= MSMg01no520_e23.b1 MSMg01no520_e23.b1 CHROMAT_FILE:
MSMg01no520_e23.b1 PHD_FILE: MSMg01no520_e23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:19 2005
(699 letters)
>mm_chr16_80132730_80133835
Length = 1106
Score = 1226 bits (634), Expect = 0.0
Identities = 681/700 (97%), Gaps = 7/700 (1%)
Strand = Plus / Minus
Query: 7 attccaaggcaataatcacatgaattacactgccacaccttctcataaatattaaacaat 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 906 attccaaggcaataatcacatgaattacactgccacaccttctcataaatattaaacaat 847
Query: 67 gtatggaagggtaagagaaatgccccagcaggtaaaaatacttcccatcaatacgcatga 126
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 846 gtatggaagggtaagagaaatgccccagcaggtaaaaatacttcccatcaatacacatga 787
Query: 127 cctgaggccagttgggcttgttgttctctgaaccatacacacacactttccactagcaca 186
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 cctgacgccagttgggcttgttgttctctgaaccatacacacacactttccactagcaca 727
Query: 187 cacatacctgtatgctcagcccagagccaactaaatatatacataaatgatacataaatt 246
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 726 cacatacctgtatgctcagcccagaaccaactaaatatatacataaatgatacataaatt 667
Query: 247 attat---tgtttgaaaaaagttataacattatatgagccaaataagagatatttatatt 303
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 attattaatgtttgaaaaaagttataacattatatgagccaaataagagatatttatatt 607
Query: 304 ttaataacttggtaatatttatttcctcatcctaacttttattgtttttgtgtgtcttcc 363
|||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||
Sbjct: 606 ttaataacttggtaatatttatttcctcgtcctaacttttattgttcttgcgtgtcttcg 547
Query: 364 tgagtatgtgcttgcatagatgtaagtgtctatgcagaacccaaaataggttgttggaac 423
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct: 546 tgagtatgtgcttgcatagatgtaagtgtctacgcagaacccaaaataggttgttggacc 487
Query: 424 acagaatgtgagttacgggcttttgcaggatacttaagttgatacagggatgctgtgacc 483
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 486 acagaatgtgagttacgggcttttgcaggatacttaagttgatacagagatgctgtgacc 427
Query: 484 agaactctgctgagccattaacctctgcatttcaacagttaactgtgtgctcatcataag 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 agaactctgctgagccattaacctctgcatttcaacagttaactgtgtgctcatcataag 367
Query: 544 aaggcaggattgacaaaaattaagtaaaattgcacacattcttaaacataatatttcata 603
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 366 aaggcaggattgacaaaaattaaataaaattgcacacattcttaaacataatatttcata 307
Query: 604 aactgtttttacagtaattgtgcatctattgttttcatccttgataga----tctttttc 659
||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 306 aactgtttttacagtaattatgcatctattgttttcatccttgatagaactgtctttttc 247
Query: 660 aatgcactaaaactttagtacatagtatgtgatcataact 699
||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 aatgcactaaaactttagtacatagtatgtgatcataact 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 699
Length of database: 1106
Length adjustment: 10
Effective length of query: 689
Effective length of database: 1096
Effective search space: 755144
Effective search space used: 755144
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no520_e23.g1 MSMg01no520_e23.g1 CHROMAT_FILE:
MSMg01no520_e23.g1 PHD_FILE: MSMg01no520_e23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:19 2005
(574 letters)
>mm_chr16_79992271_79993245
Length = 975
Score = 1089 bits (563), Expect = 0.0
Identities = 572/575 (99%), Gaps = 1/575 (0%)
Strand = Plus / Plus
Query: 1 atccttgtacattagaagcaagttactatatttcaaagcttcacaata-attcagctttt 59
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 atccttgtacattagaagcaagttactatatttcaaagcttcacaatacattcagctttt 260
Query: 60 gtcaaaacagaggacccagagaacaggattaaagttccttccctttcttcaagcctcact 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcaaaacagaggacccagagaacaggattaaagttccttccctttcttcaagcctcact 320
Query: 120 tttctcagggagaatatgtcctgcataatttatcttattaccctttttcatatattccct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttctcagggagaatatgtcctgcataatttatcttattaccctttttcatatattccct 380
Query: 180 tgcctctactagatcccacattaacctttagactaataaaatagaatgaattgaccatat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcctctactagatcccacattaacctttagactaataaaatagaatgaattgaccatat 440
Query: 240 ggttttaaaccaatattggtccatactatgggaccttttcttcatttcaaagtaatcaaa 299
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggttttaaaccaatattgatccatactatgggaccttttcttcatttcaaagtaatcaaa 500
Query: 300 tatgaccatgataagacagtaaatgtaattaaaattactgggaaataaacctaataactc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatgaccatgataagacagtaaatgtaattaaaattactgggaaataaacctaataactc 560
Query: 360 caatgaaaatattattaaatcaaaattaacacatacaaaatacataccgaaattgtaagc 419
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 561 caatgaaaatattattaaatcaaaattaacacatacaaaatacataccgaaaatgtaagc 620
Query: 420 atttctttaaaataatacatatacaccctttatgagactcaatataagtttattaaattt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atttctttaaaataatacatatacaccctttatgagactcaatataagtttattaaattt 680
Query: 480 gatttatgtatagtcacacctcaaatctggtagtctgggactcacctcaacatcactcca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gatttatgtatagtcacacctcaaatctggtagtctgggactcacctcaacatcactcca 740
Query: 540 gagctgaaacactcaatcaaggattttcagattat 574
|||||||||||||||||||||||||||||||||||
Sbjct: 741 gagctgaaacactcaatcaaggattttcagattat 775
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 975
Length adjustment: 10
Effective length of query: 564
Effective length of database: 965
Effective search space: 544260
Effective search space used: 544260
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|