Query= MSMg01no521_a16.b1 MSMg01no521_a16.b1 CHROMAT_FILE:
MSMg01no521_a16.b1 PHD_FILE: MSMg01no521_a16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:15 2005
(676 letters)
>mm_chr16_26536732_26537812
Length = 1081
Score = 1181 bits (611), Expect = 0.0
Identities = 658/685 (96%), Gaps = 20/685 (2%)
Strand = Plus / Minus
Query: 5 gaattccatcagtgaccttactgaatttataggttggaaatggtttatagtagatcttcc 64
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 718 gaattccatcagtgaccttactgaatttatagattggaaatggtttatagtagatcttcc 659
Query: 65 gacctttgtaatgtcatgagctgatttgcataagaaatcccctcttctatgcttttatat 124
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 aacctttgtaatgtcacgagctgatttgcataagaaatcccctcttctatgcttttatat 599
Query: 125 gctcttctcattctgcttctttggagaacacaagtacaaaggaaagatagtcaccgtgtg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 598 gctcttctcattctgcttctttggagaacacaagtacaaaggaaagatagtcatcgtgtg 539
Query: 185 ttctccaaacatgactatattagaaacataaataattcagccc-----ttgggggagaga 239
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 538 ttctccaaacatgactatattagaaacataaataattcagcccttgggttgggggagaga 479
Query: 240 aatgaagtttggtgggaatgacgtagacctaggaaggattagggttgatgaacatgatca 299
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 478 aatgaagttgggtgggaatgacgtagacctaggaagaattagggttgatgaacatgatca 419
Query: 300 aaatgcattggatgagattctcaggggctaatataagcattatttaaatatttgggggga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 aaatgcattggatgagattctcaggggctaatataagcattatttaaatatttgggggga 359
Query: 360 tgagttttttttttttttaacaggaagctggctgcccttggaactcaataggtagactaa 419
|||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tgag-------tttttttaacaggaagctggctgcccttggaactcaataggtagactaa 306
Query: 420 gctgacctcacattcacagtaatccttctggtcctttcaccgctggactgaagtcatgca 479
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 305 gctgacctcacattcacagtaatccttctggtcctttcactgctggactgaagtcatgca 246
Query: 480 ctcttgtgcccagcttggtcagaaatatctgaatggcaaccaatttaatgattacattaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ctcttgtgcccagcttggtcagaaatatctgaatggcaaccaatttaatgattacattaa 186
Query: 540 aaaaaa--------aaacctcaatagtgaaaactgaccttctggtaatagtttttgatct 591
|||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 aaaaaaaaaaaaacaaacctcaatagtgaaaactgaccttctggtaatagtttttgatct 126
Query: 592 ataacataagttaaaatgtatagttaaaatatcccttagtagaacactccagccttctag 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ataacataagttaaaatgtatagttaaaatatcccttagtagaacactccagccttctag 66
Query: 652 gtttttgggttgtcaactcatgttg 676
|||||||||||||||||||||||||
Sbjct: 65 gtttttgggttgtcaactcatgttg 41
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1081
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1071
Effective search space: 713286
Effective search space used: 713286
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no521_a16.g1 MSMg01no521_a16.g1 CHROMAT_FILE:
MSMg01no521_a16.g1 PHD_FILE: MSMg01no521_a16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:15 2005
(623 letters)
>mm_chr16_26384318_26385343
Length = 1026
Score = 1178 bits (609), Expect = 0.0
Identities = 620/625 (99%), Gaps = 3/625 (0%)
Strand = Plus / Plus
Query: 1 gctgtgtcatactgacagatgcatacaccacatccccaccggcttcattaaatattgact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gctgtgtcatactgacagatgcatacaccacatccccaccggcttcattaaatattgact 260
Query: 61 gaacaaacagtttactaaacatagttccgggtcttcgatcaggcagacacttgtctctga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaacaaacagtttactaaacatagttccgggtcttcgatcaggcagacacttgtctctga 320
Query: 121 ttttgttcagtattatcttgtgaatctttgacaggttacaggaaaaaatatttaaatgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttgttcagtattatcttgtgaatctttgacaggttacaggaaaaaatatttaaatgtg 380
Query: 181 atctagactgtcctgggtgcaatttgataaacagaagtcaaatatagttttagttgttag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atctagactgtcctgggtgcaatttgataaacagaagtcaaatatagttttagttgttag 440
Query: 241 taatgtctttttttcctttttattttttatttttttgagttctgatatggatttcatcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taatgtctttttttcctttttattttttatttttttgagttctgatatggatttcatcaa 500
Query: 301 atacacaatcatcatatctttggaaaatttctctttgtagttctaaaaataagctcatcg 360
||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 501 atacacaatcatcgtatctttggaaaatttctgtttgtagttctaaaaataagctcatcg 560
Query: 361 gttttctgtggctactataataatcactagtttaataatttaaaagaatagatataataa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gttttctgtggctactataataatcactagtttaataatttaaaagaatagatataataa 620
Query: 421 tcataataaataaatattacacatttacataatataaaacatttattgttttatatatga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcataataaataaatattacacatttacataatataaaacatttattgttttatatatga 680
Query: 481 ttaaaaataaaaccaaaaccctaaatgtgtctcataggattaaagttgtcagcaaggtca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttaaaaataaaaccaaaaccctaaatgtgtctcataggattaaagttgtcagcaaggtca 740
Query: 541 cctacttttctggaactttttggattttgccttgccagattttggctaatgacatctt-- 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cctacttttctggaactttttggattttgccttgccagattttggctaatgacatcttct 800
Query: 599 -actgctttcaaagctggaagcttg 622
||||||||||||||||||||||||
Sbjct: 801 tactgctttcaaagctggaagcttg 825
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1026
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1016
Effective search space: 622808
Effective search space used: 622808
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
