CCCTCCTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCCTTGCCTCTTTCTAGAACTATATGCCACATAGCAGAACACAA
GAATATTTACAATGGTATAATAGTTTTGCAAGCAAAGACATAACAAAAGT
TGCAAGCAAAAATCCCACCCATGCTAGAGACAATAAAAAAATGACATTAA
ATGAAAATATCTATCTTTTCTGAAATTTGTCTCACTCTAAATTGTTGTAG
GACACACTGTTTCGATGCCTAGCTGCTGTTAATTAGATCAGCACAGGCGC
TGGAGCTTTGGTTTTCCTTTTGAGTGTTGCCACCAGCTGCAAAACATCCA
TTTCCTCATAATTGATTCTCAAGTTTATTTGCAATGTTCCATGAGGCATA
GCCTACTGAAATGACTCATCATGTTTATGGGAACAACATAAGAATAAAGG
TTATGTTTGAATGGTTTTGCCATATTAAATTTAGACTAAAAACATGGTTT
CTTGGAAGTTATTTTAAGCCAGCTTTTAAATATACAAATTTAATTAGATT
TCAATTTGAAAATCACTTTCCTTTATGAGAAGTAGTCAGTTCCAAAACTG
TTAAAAGGAGGGCCTACTTAAGGTATGAGTCTATGCTAGTTTAGAATTTA
CATACAAAGAAATACATTGTTTTAATGCAAATTAACTTATTTTTATGGCC
AGGTTATATTAAAATTTTAACTTGGAAGAATATTTTTAN

NCCCACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCATCTGAGGAATACGAAA
TGGATGAGAGCACCTGAAAAAATGTTCAGCATCCTTAATCATCAGAGAAA
TGCAAATCAAAACAACCCTGAGATTCCATCTCACACCAGTCAGAATGGCT
AAGATCAAAAATTCAGGTGAAAGCAGATGCTGGCAAGGATGTGGAGAAAG
AGGAACACTCCTCCATTGTTAGTGGGATTGCAAGCTTGTACAACCACCCT
GGAAATCAGTCTGGCAGTTCCTCAGAAAATTGGACATAGTACTACTGGAG
GATCCTGCAATACCAGATCTGGGCATATATCCAGAAGATGTTCCAACCAG
TAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAG
CCAGAAGCTGAAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAA
AAAATATGGTACATTTACACAATGGAGTACTACTCAGTTATTAAAAGGAA
TGAATTTATGAAATTCCTAGGCAAATGGATGGACCTGGGGGGCATCATCC
TGAGTGAGGTAACACAATCACAAAAGAACTCAAATGATATGTACTCACTG
ATAAGTGGATATTAGCCCAGAAACTTANGATACCTCAGATATAAGATACA
TTTTGCAAAACACATGAAACTGAAGAAGAATGAAG

Query= MSMg01no521_d18.b1 MSMg01no521_d18.b1 CHROMAT_FILE:
MSMg01no521_d18.b1 PHD_FILE: MSMg01no521_d18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:30 2005
         (691 letters)



>mm_chr16_66709015_66710108
          Length = 1094

 Score = 1071 bits (554), Expect = 0.0
 Identities = 570/576 (98%), Gaps = 3/576 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccttgcctctttctagaactatatgccacatagcagaacacaagaatatttacaa 64
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 780 gaattccttgcctctttctagaactatatgccacatagcagaacacaggaatatttacaa 721

                                                                       
Query: 65  tggtataatagttttgcaagcaaagacataacaaaagttgcaagcaaaaatcccacccat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 tggtataatagttttgcaagcaaagacataacaaaagttgcaagcaaaaatcccacccat 661

                                                                       
Query: 125 gctagagacaataaaa--aaatgacatt-aaatgaaaatatctatcttttctgaaatttg 181
           ||||||||||||||||  |||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 660 gctagagacaataaaaataaatgacattaaaaagaaaatatctatcttttctgaaatttg 601

                                                                       
Query: 182 tctcactctaaattgttgtaggacacactgtttcgatgcctagctgctgttaattagatc 241
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 tttcactctaaattgttgtaggacacactgtttcgatgcctagctgctgttaattagatc 541

                                                                       
Query: 242 agcacaggcgctggagctttggttttccttttgagtgttgccaccagctgcaaaacatcc 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 agcacaggcgctggagctttggttttccttttgagtgttgccaccagctgcaaaacatcc 481

                                                                       
Query: 302 atttcctcataattgattctcaagtttatttgcaatgttccatgaggcatagcctactga 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 atttcctcataattgattctcaagtttatttgcaatgttccatgaggcatagcctactga 421

                                                                       
Query: 362 aatgactcatcatgtttatgggaacaacataagaataaaggttatgtttgaatggttttg 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 aatgactcatcatgtttatgggaacaacataagaataaaggttatgtttgaatggttttg 361

                                                                       
Query: 422 ccatattaaatttagactaaaaacatggtttcttggaagttattttaagccagcttttaa 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ccatattaaatttagactaaaaacatggtttcttggaagttattttaagccagcttttaa 301

                                                                       
Query: 482 atatacaaatttaattagatttcaatttgaaaatcactttcctttatgagaagtagtcag 541
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 atatacaaatttaattagatttcaatttgaaaatcactttcctttatgagaagtagtcag 241

                                               
Query: 542 ttccaaaactgttaaaaggagggcctacttaaggta 577
           ||||||||||||||||||||||||||||||||||||
Sbjct: 240 ttccaaaactgttaaaaggagggcctacttaaggta 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 691
Length of database: 1094
Length adjustment: 10
Effective length of query: 681
Effective length of database: 1084
Effective search space:   738204
Effective search space used:   738204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)