Query= MSMg01no523_n11.b1 MSMg01no523_n11.b1 CHROMAT_FILE:
MSMg01no523_n11.b1 PHD_FILE: MSMg01no523_n11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:54 2005
(449 letters)
>mm_chr16_37785571_37786420
Length = 850
Score = 847 bits (438), Expect = 0.0
Identities = 447/450 (99%), Gaps = 1/450 (0%)
Strand = Plus / Plus
Query: 1 tggctttttctcctttgttgttttc-aaagtaaactcctgagtctgagaaaaacattgtc 59
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 tggctttttctcctttgttgttttcaaaagtaaactcctgagtctgagaaaaacattgtc 260
Query: 60 tttccccgggctttcattgatccttcataaatatgacttattaatctgcagaagcctcag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttccccgggctttcattgatccttcataaatatgacttattaatctgcagaagcctcag 320
Query: 120 gcattacctcatggcccttcctggggtgttatatcagtcactttacacacttccctccat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcattacctcatggcccttcctggggtgttatatcagtcactttacacacttccctccat 380
Query: 180 tagcagcagtgtgagactaataggactgcacaggactttcctggaggcgctgcctgcatc 239
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagcagcagtgtgagactaacaggactgcacaggactttcctggaggcgctgcctgcatc 440
Query: 240 atcactgtagacagcccaaatggctctggccgctagggacaacaggaacgagcagcccgt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atcactgtagacagcccaaatggctctggccgctagggacaacaggaacgagcagcccgt 500
Query: 300 ccttacctcttgcatctgatttagaaaattctgagagacagcagtgggatgtgtggtccc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccttacctcttgcatctgatttagaaaattctgagagacagcagtgggatgtgtggtccc 560
Query: 360 tgccaaccagaattccaggggctgctcaagggcagctgggatcgtttctgcctgctgacc 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgccaaccagaattccaggggctgctcaagggcagctgggatcgtttctgcctgctgaca 620
Query: 420 ttgtcttctctgtcagcgtggccactgtgg 449
||||||||||||||||||||||||||||||
Sbjct: 621 ttgtcttctctgtcagcgtggccactgtgg 650
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 850
Length adjustment: 10
Effective length of query: 439
Effective length of database: 840
Effective search space: 368760
Effective search space used: 368760
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no523_n11.g1 MSMg01no523_n11.g1 CHROMAT_FILE:
MSMg01no523_n11.g1 PHD_FILE: MSMg01no523_n11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:54 2005
(521 letters)
>mm_chr16_37915077_37915997
Length = 921
Score = 984 bits (509), Expect = 0.0
Identities = 518/521 (99%)
Strand = Plus / Minus
Query: 1 actttggagaccaggctggcctcgaactcacagagttcgactgcctctgccgctggaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 actttggagaccaggctggcctcgaactcacagagttcgactgcctctgccgctggaggg 740
Query: 61 ctgggattaaaggcttgcatttcaaacaccacattttgaccacatattttagggacagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ctgggattaaaggcttgcatttcaaacaccacattttgaccacatattttagggacagga 680
Query: 121 ggggagggggaaccgagtaggactccagggttcagatcacacatggtaaggaggattggc 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 679 ggggagggggaaccgagtaggacttcagggttcagatcacacatggtaaggaggattggc 620
Query: 181 tttaaaattttttaacccctccctcactatttcacccaaaggcttcttttcacaggaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tttaaaattttttaacccctccctcactatttcacccaaaggcttcttttcacaggaaaa 560
Query: 241 tacttcattggagaggaaaatatggggaaagaaatgaagcaaacgttttattcaggacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tacttcattggagaggaaaatatggggaaagaaatgaagcaaacgttttattcaggacaa 500
Query: 301 tgcgtgtttctcacatcttgtcctgaatgtgagacactgagcaaaatgtgagtttctgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tgcgtgtttctcacatcttgtcctgaatgtgagacactgagcaaaatgtgagtttctgtt 440
Query: 361 ctgtgcagttagattctgtcattggggaggccccctttgattctccacttttggggttac 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ctgtgcagttagatgctgtcattggggaggccccctttgattctccacttttggggttac 380
Query: 421 tcagtttaaaaacccaggacagggatgttggaacaatgcctcatgtggtagagcaatcac 480
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tcagtttaaaagcccaggacagggatgttggaacaatgcctcatgtggtagagcaatcac 320
Query: 481 tctggaagcgtgaggacctgctggggttccccaacaaaagc 521
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tctggaagcgtgaggacctgctggggttccccaacaaaagc 279
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 921
Length adjustment: 10
Effective length of query: 511
Effective length of database: 911
Effective search space: 465521
Effective search space used: 465521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
