Query= MSMg01no524_k10.b1 MSMg01no524_k10.b1 CHROMAT_FILE:
MSMg01no524_k10.b1 PHD_FILE: MSMg01no524_k10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:59 2005
(585 letters)
>mm_chr16_7038589_7039573
Length = 985
Score = 1120 bits (579), Expect = 0.0
Identities = 579/579 (100%)
Strand = Plus / Plus
Query: 7 gaattcacctaacagctgcggtggattctccggtttagcctccaggcttggggctgcccc 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcacctaacagctgcggtggattctccggtttagcctccaggcttggggctgcccc 266
Query: 67 ggaggggctgattccagggggaaagcagcgtccggaacaccgcggggggcccaggaacct 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ggaggggctgattccagggggaaagcagcgtccggaacaccgcggggggcccaggaacct 326
Query: 127 ctttattgctccctcccccctcagcaccccaaaccttggagtgtccatcacccccaagct 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ctttattgctccctcccccctcagcaccccaaaccttggagtgtccatcacccccaagct 386
Query: 187 tcttacaaaaggggaattccttttcatgtgtttatttgccaacgagtcaggcaaacaaac 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tcttacaaaaggggaattccttttcatgtgtttatttgccaacgagtcaggcaaacaaac 446
Query: 247 cgccgactgaaaatctcccggactcctcagggtcccagctgagcagtcttgttaatggtc 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 cgccgactgaaaatctcccggactcctcagggtcccagctgagcagtcttgttaatggtc 506
Query: 307 cagctcctttgattgctggagatgtggggcgctcacatgctcgatctccctcccctcgaa 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 cagctcctttgattgctggagatgtggggcgctcacatgctcgatctccctcccctcgaa 566
Query: 367 ggattttagcagacaaaatttaaattttagcgagtcccttttttaaaaagaaagaaacgc 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ggattttagcagacaaaatttaaattttagcgagtcccttttttaaaaagaaagaaacgc 626
Query: 427 acaaccctgcccctggacctccttggcaaatgagaagactcccagcatcagcaccaagca 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 acaaccctgcccctggacctccttggcaaatgagaagactcccagcatcagcaccaagca 686
Query: 487 agtgagcgacagagaagctgtaagtcaaaatcaatttctctctctctctctctctctctc 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 agtgagcgacagagaagctgtaagtcaaaatcaatttctctctctctctctctctctctc 746
Query: 547 tctctctctctctctctctctctctctctctctctctct 585
|||||||||||||||||||||||||||||||||||||||
Sbjct: 747 tctctctctctctctctctctctctctctctctctctct 785
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 140
Number of extensions: 51
Number of successful extensions: 51
Number of sequences better than 10.0: 1
Number of HSP's gapped: 49
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space: 560625
Effective search space used: 560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no524_k10.g1 MSMg01no524_k10.g1 CHROMAT_FILE:
MSMg01no524_k10.g1 PHD_FILE: MSMg01no524_k10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:59 2005
(709 letters)
>mm_chr16_7203058_7204166
Length = 1109
Score = 1361 bits (704), Expect = 0.0
Identities = 704/704 (100%)
Strand = Plus / Minus
Query: 6 aattcttaacaagaagggaaaaggaagaatattcctcctgagttctagaacaacaacaac 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 aattcttaacaagaagggaaaaggaagaatattcctcctgagttctagaacaacaacaac 850
Query: 66 aacaaaaatctgaaaagcaggaagcctattgtttgaatctgcaatccctatgattgaaat 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 aacaaaaatctgaaaagcaggaagcctattgtttgaatctgcaatccctatgattgaaat 790
Query: 126 acatagtgtaaatggtacagccaccccatgtttcagttgatgtctctggaaatggggata 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 acatagtgtaaatggtacagccaccccatgtttcagttgatgtctctggaaatggggata 730
Query: 186 ttaacagaacttattttgttgggttattcataaaaaagttagataatgctcatgaattcc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 ttaacagaacttattttgttgggttattcataaaaaagttagataatgctcatgaattcc 670
Query: 246 tcaccactttgcttaaaataaaacaagcctttgatgaatttgtgtgtcaaatgagcatgg 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 tcaccactttgcttaaaataaaacaagcctttgatgaatttgtgtgtcaaatgagcatgg 610
Query: 306 catccttgctgtcattattgctattattcaaataagaaaataacttggaacgacaatgta 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 catccttgctgtcattattgctattattcaaataagaaaataacttggaacgacaatgta 550
Query: 366 cactaagtaaaggaaaatatttccaaaataaaaagaattcatcaaaattcaaccagggtg 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 cactaagtaaaggaaaatatttccaaaataaaaagaattcatcaaaattcaaccagggtg 490
Query: 426 taaaggaacacaatgagggagtagagactaaatttgtatcatcatactattgatattaca 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 taaaggaacacaatgagggagtagagactaaatttgtatcatcatactattgatattaca 430
Query: 486 ctgggcttggaagaaaaaataccagcctctaatagaaagaaccacagaaatatcgctgta 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ctgggcttggaagaaaaaataccagcctctaatagaaagaaccacagaaatatcgctgta 370
Query: 546 ctgcacttcttggaatgaaccttggttatcactcacctttgattttttttgtcatttttt 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ctgcacttcttggaatgaaccttggttatcactcacctttgattttttttgtcatttttt 310
Query: 606 ttttgtcttctgatgtaggttttcacataccccagactaccccggaagacattacataac 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ttttgtcttctgatgtaggttttcacataccccagactaccccggaagacattacataac 250
Query: 666 tgaagatgcccttggacttctggtactctctcatataatctaag 709
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tgaagatgcccttggacttctggtactctctcatataatctaag 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 709
Length of database: 1109
Length adjustment: 10
Effective length of query: 699
Effective length of database: 1099
Effective search space: 768201
Effective search space used: 768201
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
|
