Query= MSMg01no525_e03.b1 MSMg01no525_e03.b1 CHROMAT_FILE:
MSMg01no525_e03.b1 PHD_FILE: MSMg01no525_e03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:48 2005
(701 letters)
>mm_chr16_67318844_67319943
Length = 1100
Score = 1156 bits (598), Expect = 0.0
Identities = 616/622 (99%), Gaps = 3/622 (0%)
Strand = Plus / Minus
Query: 81 gaacacataggaaaggaatttttaatatactcagctttttttgacaatgaaaataaaaca 140
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1100 gaacacataggaaaggaattattaatatactcagctttttttgacaatgaaaataaaaca 1041
Query: 141 tgacaacggtatatttagcaaattgatgacaaaatttataatatggtaataacaggaaaa 200
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1040 tgacaacagtatatttagcaaattgatgacaaaatttataatatggtaataacaggaaaa 981
Query: 201 ggataagatcccataaatattgatataaacatgaagtttctaaagtatactgtgaacatt 260
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 980 ggataagatcccataaatattgatataaacatgaagattctaaagtatactgtgaacatt 921
Query: 261 aaatatataattaaaaatttgcaaagttttcaaatatattaagaacattatcatcatggt 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 aaatatataattaaaaatttgcaaagttttcaaatatattaagaacattatcatcatggt 861
Query: 321 tgttgataattacttaattactactaattaggatactcttgaaatcttcctgtttaaata 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 tgttgataattacttaattactactaattaggatactcttgaaatcttcctgtttaaata 801
Query: 381 -aaattattttttcctactgtaatgggttccaagatagagataaggtgtattttctgtgt 439
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 caaattattttttcctactgtaatgggttccaagatagagataaggtgtattttctgtgt 741
Query: 440 taatttataattaaatagagcagtgtacacaatttttgatttccaaacttatatttcagt 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 taatttataattaaatagagcagtgtacacaatttttgatttccaaacttatatttcagt 681
Query: 500 cattatttcatataggaattttgatgtcctcaaattttgttctgatcaaagagttcagaa 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 cattatttcatataggaattttgatgtcctcaaattttgttctgatcaaagagttcagaa 621
Query: 560 aaaaatgcaaatatatccctaaaagtctcattatacaaaatatgggtttgataaaattgt 619
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aaaa-tgcaaatatatccctaaaagtctcattatacaaaatatgggtttgataaaattgt 562
Query: 620 taaaattcactacttattgcttacatattttgtgtattaagaatattgaatgtaattaga 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taaaattcactacttattgcttacatattttgtgtattaagaatattgaatgtaattaga 502
Query: 680 tacattcaaatgtaatacaatc 701
||||||||||||||| ||||||
Sbjct: 501 tacattcaaatgtaa-acaatc 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 701
Length of database: 1100
Length adjustment: 10
Effective length of query: 691
Effective length of database: 1090
Effective search space: 753190
Effective search space used: 753190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no525_e03.g1 MSMg01no525_e03.g1 CHROMAT_FILE:
MSMg01no525_e03.g1 PHD_FILE: MSMg01no525_e03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:48 2005
(674 letters)
>mm_chr16_67185262_67186336
Length = 1075
Score = 1226 bits (634), Expect = 0.0
Identities = 664/674 (98%), Gaps = 1/674 (0%)
Strand = Plus / Plus
Query: 1 cattgtaataaatgaaatcaaaacactaaaatgtgtgaatccactggttctactaacaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cattgtaataaatgaaatcaaaacactaaaatgtgtgaatccactggttctactaacaat 260
Query: 61 ggttctcaggttgttctgcatgtcttagtctaaattgatagtaactgtgtagaaaaccct 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 ggttctcaggttgttctgcatgtcttagtctaaattgatagtaactctgtagaaaaccct 320
Query: 121 taaagaaatgtaactaagaacattggtaaagtaccaactgatgctggtgacagccaaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaagaaatgtaactaagaacattggtaaagtaccaactgatgctggtgacagccaaata 380
Query: 181 tagaaatctcataattgctttcccagaacagttagagcatttggaaaacgccagtgtaag 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 tagaaatctcataattgctttcccagaacagttagagcatttggaaaacgccggtgtaag 440
Query: 241 gtaatattcaaggaaaactagtgaaggaacaatggggacatattttagcttcacaacata 300
||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 441 gtaatattcaatgaaaaccagtgaaggaacaatggggaaatattttagcttcacaacata 500
Query: 301 gagaacttgcttcacatacaaggtacaaggtatatggtatgggaagaactcagcaatttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagaacttgcttcacatacaaggtacaaggtatatggtatgggaagaactcagcaatttt 560
Query: 361 caagaaaataa-caaagaaaaaatgtcacatgtttctctgaatgtgaaccatcatataga 419
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caagaaaaaaaacaaagaaaaaatgtcacatgtttctctgaatgtgaaccatcatataga 620
Query: 420 aaactctatttttcataaatgggttatggcacatgcccaacatgtcaagatttatgatgt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaactctatttttcataaatgggttatggcacatgcccaacatgtcaagatttatgatgt 680
Query: 480 aaaggcatgaatatcagttcagtagtgttaagccaccctgagttactgagatcccatctc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaaggcatgaatatcagttcagtagtgttaagccaccctgagttactgagatcccatctc 740
Query: 540 aaaatacgtgagcaaataacagtaacataggaaaacgtaccagcttaacattaaactttg 599
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 741 aaaatacgtgagcaaataacagtaacataggaaaacataccagcttaacattaaactttg 800
Query: 600 ctatgtttaatattctaagaaattcttttaaaataaataacaaagcctcaaacaatctaa 659
|||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 801 ctatgtttaatattctaagaaattgttttaaaataaataacaaagcctcaaacgatctaa 860
Query: 660 gcaaatcttcataa 673
||||||||||||||
Sbjct: 861 gcaaatcttcataa 874
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1075
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1065
Effective search space: 707160
Effective search space used: 707160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
