Query= MSMg01no525_g05.b1 MSMg01no525_g05.b1 CHROMAT_FILE:
MSMg01no525_g05.b1 PHD_FILE: MSMg01no525_g05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:59 2005
(632 letters)
>mm_chr16_67189817_67190849
Length = 1033
Score = 1185 bits (613), Expect = 0.0
Identities = 628/633 (99%), Gaps = 1/633 (0%)
Strand = Plus / Plus
Query: 1 actacacagcaaaccctactttagataaacaaacaaaaaatgcgcagataacaaacaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actacacagcaaaccctactttagataaacaaacaaaaaatgcgcagataacaaacaaac 260
Query: 61 aaaaataacactaaggaaaaaactgtaaaatatatcttgcctagggaaaggcaagaggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaataacactaaggaaaaaactgtaaaatatatcttgcctagggaaaggcaagaggag 320
Query: 121 gaaaaattaagattgatattttctctatattctggaaaagaatagcaaaattcaggtcaa 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 gaaaaattaagattgatattttctctatattctggaaaataatagcaaaattcaggtcaa 380
Query: 181 tatgaccttttctaagtctcggctttctagcccagacagtatgcagagaaccacagtaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatgaccttttctaagtctcggctttctagcccagacagtatgcagagaaccacagtaga 440
Query: 241 ccaatccatatctgtgggatactagaacaaacttttagagctctgtgctatagatcaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccaatccatatctgtgggatactagaacaaacttttagagctctgtgctatagatcaagt 500
Query: 301 tacccttactgtttgttttgcacaactgttttctttcatgcaaagctctctacccacggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tacccttactgtttgttttgcacaactgttttctttcatgcaaagctctctacccacggg 560
Query: 361 cagaggagtgatgtgctgtagagtaataaaaatatgtgcttactgattctctatgctgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagaggagtgatgtgctgtagagtaataaaaatatgtgcttactgattctctatgctgca 620
Query: 421 ggagacatggaggcagtcctttgcggagaaaaatgagtacattagagctggtctctggcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggagacatggaggcagtcctttgcggagaaaaatgagtacattagagctggtctctggcg 680
Query: 481 tggatgagaattgttcagtgggtgagacagggtagtaaaatgaatggccacacgaaagca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tggatgagaattgttcagtgggtgagacagggtagtaaaatgaatggccacacgaaagca 740
Query: 541 gaaaattgatgcccaaatagagataatagaaaaacacatgtgaagctcaaacacacacaa 600
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 741 gaaaattgatgcccaaagagagataatagaaaaacacacgtgaagctcaaacacacacaa 800
Query: 601 aataaaa-ccatgtgtctcgatatgtaagaaga 632
|| |||| |||||||||||||||||||||||||
Sbjct: 801 aaaaaaaaccatgtgtctcgatatgtaagaaga 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1033
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1023
Effective search space: 636306
Effective search space used: 636306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no525_g05.g1 MSMg01no525_g05.g1 CHROMAT_FILE:
MSMg01no525_g05.g1 PHD_FILE: MSMg01no525_g05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:59 2005
(647 letters)
>mm_chr16_67290930_67291979
Length = 1050
Score = 1011 bits (523), Expect = 0.0
Identities = 611/651 (93%), Gaps = 20/651 (3%)
Strand = Plus / Minus
Query: 1 aaaaggattttaaatcataaaacagtttgtgaggtatgtatggttacaatgtatgttata 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 904 aaaaggattttaaatcataaaatagtttgtgaggtatgtatggttacaatgtatgttata 845
Query: 61 ttttacaagagatgggtgaaaacaaaattcagtccaattttactttaatttaaaatg-tt 119
|||||||||| |||||||||||||||||||| |||||||||| |||||||||||||| ||
Sbjct: 844 ttttacaagaaatgggtgaaaacaaaattcactccaattttaatttaatttaaaatgttt 785
Query: 120 ttttcttttttataagctgtaattaaaattaaaattttacattagatccaccaacctgcc 179
||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 784 ttttc-tttttataagctggaactaaaattaaaattttacattagatccaccaacctgcc 726
Query: 180 tcatagttgtcaggcttttctgataaaaacttgaagactccaagctctctccaccactac 239
||||| ||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 725 tcataattgtcaggcgtttctgataaaaa---------------ctctctccaccactac 681
Query: 240 acttgggtcattgctgcatttccaatatgcaagatgtgcaggaaggccagtccagtatag 299
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 680 acttgggtcattgctgcatttccaatatgcaagatgtgcaggaaggccagtgtggtatag 621
Query: 300 actttttgcatccaaatcaatcaactttaatctcaaaga---tttttttcatgtgtcata 356
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 620 actttttgcatccaaatcaatcaactttaatctcaaagattttttttttcatgtgtcata 561
Query: 357 tattctgaaattagaaaactttaaatttgtaatgccatcacttaaaacagttcctataat 416
||||||||||||||||||||||||||||| |||| ||| ||||||||||| |||||||||
Sbjct: 560 tattctgaaattagaaaactttaaatttgaaatgacataacttaaaacagatcctataat 501
Query: 417 ttggttaaaaactttagattcaatggttattaagtagactaaacagaatcctgtaacatt 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttggttaaaaactttagattcaatggttattaagtagactaaacagaatcctgtaacatt 441
Query: 477 acatcaagtgaagaagatcccagagactgagccaggaacctaggagcatacgtagactgg 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 acatcaagtgaagaagatcccagagactgagccaggaacctaggagcatacgtagactgg 381
Query: 537 tctgaggcctcctgcacttatataggagaggactgccttgtctggcctcagtgggaggaa 596
|||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 380 tctgaggcctcctgcacttatacaggagaggactgccttgtctggtctcagtgggaggaa 321
Query: 597 gtgtgcctattcctgtagagacttgatgctccatggtggtgtaatactcag 647
|||||||| |||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 320 gtgtgcctgttcctgtagagacttgatgccccatggcggtgtaatactcag 270
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1050
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1040
Effective search space: 662480
Effective search space used: 662480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
