Query= MSMg01no525_i23.b1 MSMg01no525_i23.b1 CHROMAT_FILE:
MSMg01no525_i23.b1 PHD_FILE: MSMg01no525_i23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:13 2005
(549 letters)
>mm_chr16_66792377_66793330
Length = 954
Score = 986 bits (510), Expect = 0.0
Identities = 539/550 (98%), Gaps = 5/550 (0%)
Strand = Plus / Minus
Query: 5 gaattc-aaataaattcttaaagagcagttttccatcagtcttctcttgaacttatttct 63
|||||| |||||||| | ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 754 gaattcaaaataaatacataaagagcagttttccatcagtcttctctggaacttatttct 695
Query: 64 ctaacatgatattttaagatggtttttagagttgagtttcaggagtatatcttgcttaaa 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 694 ctaacatgatattttaagatggtttttagagttgagtttcaggagtatatcttgctcaaa 635
Query: 124 agaacctttaatctcaggtgctaattagtgctagtaccattcatttatgactatggcaaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 agaacctttaatctcaggtgctaattagtgctagtaccattcatttatgactatggcaaa 575
Query: 184 attcaagattttattggccccattgtagagagagaacctgatgagagttttaaactgttt 243
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 attcaagattttattggctccattgtagagagagaacctgatgagagttttaaactgttt 515
Query: 244 cttatagaatggggatgtatggagcattactaatgcactttttctagggaattcatcttc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 cttatagaatggggatgtatggagcattactaatgcactttttctagggaattcatcttc 455
Query: 304 aagatcttttcaagtacaacagagaaagtagttttcgttttgacatcgggttatgtgaga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 aagatcttttcaagtacaacagagaaagtagttttcgttttgacatcgggttatgtgaga 395
Query: 364 cttcgtctcccttggtctctctattttgtttggataacttttgaagttggtttaaaat-- 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 cttcgtctcccttggtctctctattttgtttggataacttttgaagttggtttaaaatca 335
Query: 422 -aaaaaaaaaattctcttgaacaatagaaaatgtgaaggggatttgattacttaacttta 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aaaaaaaaaaattctcttgaacaatagaaaatgtgaaggggatttgattacttaacttta 275
Query: 481 acataaaagcgaggcaagccataatatccc-tggtttcaggttttaaactttatactatg 539
|||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 274 acataaaagcgaggcaagccataatatcccctggtttcaggttttaaactttatattatg 215
Query: 540 aagtgagcca 549
||||||||||
Sbjct: 214 aagtgagcca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 954
Length adjustment: 10
Effective length of query: 539
Effective length of database: 944
Effective search space: 508816
Effective search space used: 508816
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no525_i23.g1 MSMg01no525_i23.g1 CHROMAT_FILE:
MSMg01no525_i23.g1 PHD_FILE: MSMg01no525_i23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:13 2005
(626 letters)
>mm_chr16_66625583_66626608
Length = 1026
Score = 1164 bits (602), Expect = 0.0
Identities = 620/626 (99%)
Strand = Plus / Plus
Query: 1 atcttttctggtagaagacatgcatgcttttagagacccagtaacagaatatgccttaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcttttctggtagaagacatgcatgcttttagagacccagtaacagaatatgccttaaa 260
Query: 61 ccagaaagttaaataactataattaaatttttgtagacatatgccatcaaatgttaattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccagaaagttaaataactataattaaatttttgtagacatatgccatcaaatgttaattc 320
Query: 121 taaattagttggaaatattaagattaagatgggttgagtgacctagccaaccacacacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaattagttggaaatattaagattaagatgggttgagtgacctagccaaccacacacca 380
Query: 181 ctgcttagcaatactgtatactgtagagtgctggttagatgctctcaggatcccatggat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgcttagcaatactgtatactgtagagtgctggttagatgctctcaggatcccatggat 440
Query: 241 ggctgggaactgtggctcactgctcacaattagaattacaccagagcactatttcctatg 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggctgggaactatggctcactgctcacaattagaattacaccagagcactatttcctatg 500
Query: 301 aacagtctgggaaaatataaaaattcagaaaacgacttgtagttttactgtatgtgtgtg 360
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 accagtccgggaaaatataaaaattcagaaaacgacttgtagttttactgtatgtgtgtg 560
Query: 361 gcttttaaaatactggaaagtcaaaatgctagaaagatattggaaattgagcaggcttgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcttttaaaatactggaaagtcaaaatgctagaaagatattggaaattgagcaggcttgt 620
Query: 421 gctctaaaactttaattcattcatgttttatttaatctgcaagcattgcctggcatctac 480
||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 621 gctctaaaactttaattcattcatgttttatttaatccgcaagcattgcctggcttctac 680
Query: 481 catatgctggcctgtaaaatagatactaggaattaaaatgtcttttctgtttatcacaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 catatgctggcctgtaaaatagatactaggaattaaaatgtcttttctgtttatcacaaa 740
Query: 541 gttcttttctttcctctgctataggcagagattcagtacatttattgtgctaacagttcc 600
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gttcttttctttcctctgttataggcagagattcagtacatttattgtgctaacagttcc 800
Query: 601 tatttgtccataaaagagagcaagat 626
||||||||||||||||||||||||||
Sbjct: 801 tatttgtccataaaagagagcaagat 826
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space: 625856
Effective search space used: 625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
