Query= MSMg01no527_d02.b1 MSMg01no527_d02.b1 CHROMAT_FILE:
MSMg01no527_d02.b1 PHD_FILE: MSMg01no527_d02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:21 2005
(664 letters)
>mm_chr16_72885398_72886461
Length = 1064
Score = 1013 bits (524), Expect = 0.0
Identities = 545/552 (98%), Gaps = 1/552 (0%)
Strand = Plus / Minus
Query: 113 cttgggcactaatgctatccctggccacaactgggacaacctcaaatcatctgcccattt 172
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1064 cttgggcactaatgctatccctggccacaactgggacaacctcaaatcatttgcccattt 1005
Query: 173 aaactttcccgaagtcttcagcatttgcatgcattatgcttctaggcagcaagacttata 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1004 aaactttcccgaagtcttcagcatttgcatgcattatgcttctaggcagcaagacttata 945
Query: 233 tggaaaatccctttcaaagatttatcctttattaaatcaaaaaaattatttgttaagaca 292
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 944 tggaaaatccctttcaaagatttatcctttattaaatc-aaaaaattatttgttaagaca 886
Query: 293 tttttaaataaaaaattaaaccagtcttttggaaacttcacaaaacttaaattttactta 352
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 885 tttttaaataaaaaattaaatcagtcttttggaaacttcacaaaacttaaattttactta 826
Query: 353 taacttaaagaggtgggattgttcagttttgtgcggaatctaattctcagtaaattataa 412
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 825 taacttaaagaggtgggattgttcagttttgtgtggaatctaattctcagtaaattataa 766
Query: 413 acttctaataacgtgtgtcatatacattgaaggaatgcattattttgtacatattccttg 472
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 765 acttctaataacgtgtgtcatatacattgaaggaatgcatcattttgtacatattccttg 706
Query: 473 gtataaatggccaatttgtatccatcacaaagcaaaggtgaagagctgggaaaccatcgc 532
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 705 gtataaatggccaatttgtatccatcacaaaacaaaggtgaagagctgggaaaccatcgc 646
Query: 533 atgaaattatggccagcttaatagcaggttttccactaaattacccagatgaacacagac 592
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 atgaaattatggccagcttaatagcaggttttccactaaattacccagatgaacacagat 586
Query: 593 ctggaccaactacatcccaagcagctcatgtgagtaatttccagggggcgggaactgcag 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 ctggaccaactacatcccaagcagctcatgtgagtaatttccagggggcgggaactgcag 526
Query: 653 catttaacaaga 664
||||||||||||
Sbjct: 525 catttaacaaga 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space: 689316
Effective search space used: 689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no527_d02.g1 MSMg01no527_d02.g1 CHROMAT_FILE:
MSMg01no527_d02.g1 PHD_FILE: MSMg01no527_d02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:21 2005
(326 letters)
>mm_chr16_72765010_72765740
Length = 731
Score = 588 bits (304), Expect = e-172
Identities = 317/324 (97%), Gaps = 5/324 (1%)
Strand = Plus / Plus
Query: 1 ttaatacccaacataaaacttaagacaaattcattttgtatctgaatcagttttatcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaatacccaacataaaacttaagacaaattcattttgtatctgaatcagttttatcttt 260
Query: 61 atacaaaattatactgaagcattctttttttttttttttttt-----acttccactggaa 115
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 atacaaaattatactgaagcattctttttttttttttttttttttttacttccactggaa 320
Query: 116 taatagggtaatatggtggtccgtagggtcttcaacctgcatgtaaatatttaactttta 175
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caatagggtaatatggtggtccgtagggtcttcaacctgcatgtaaatatttaactttta 380
Query: 176 cgctctcctatgtttttctcctgacccatactggaccacagacaggaaccagtggaatat 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgctctcctatgtttttctcctgacccatactggaccacagacaggaaccagtggaatat 440
Query: 236 tagaattgctttttttgcagtccccttttacacacacacacgtgtgtgtgtgtgtgtgtg 295
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagaattgcttttcttgcagtccccttttacacacacacacgtgtgtgtgtgtgtgtgtg 500
Query: 296 tgtgtgtgtgtgtgtgtgtgtgtg 319
||||||||||||||||||||||||
Sbjct: 501 tgtgtgtgtgtgtgtgtgtgtgtg 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 69
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 731
Length adjustment: 9
Effective length of query: 317
Effective length of database: 722
Effective search space: 228874
Effective search space used: 228874
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
