Query= MSMg01no527_d16.b1 MSMg01no527_d16.b1 CHROMAT_FILE:
MSMg01no527_d16.b1 PHD_FILE: MSMg01no527_d16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:24 2005
(212 letters)
>mm_chr16_81373885_81374496
Length = 612
Score = 356 bits (184), Expect = e-103
Identities = 193/196 (98%)
Strand = Plus / Plus
Query: 4 ggaattctgacttactatttgaagaggtgatggatgccctaaactctaaaattatagctg 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 204 ggaattctgacttactctttgaagaggtgatggatgccctaaactctaaaattatggctg 263
Query: 64 cccatttcaaggtgatgcttcaaaatgaattgtaatgaagaaaaaatatccaggaatttt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cccatttcaaggtgatgcttcaaaatgaattgtaatgaagaaaaaatatccaggaatttt 323
Query: 124 gagcaaccatagttcaagtgactttacgatatcattgtgatatagttaaaaatgtgatat 183
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 324 gagcaaccatagttcaagtgactttatgatatcattgtgatatagttaaaaatgtgatat 383
Query: 184 ggtggtggtggtggtg 199
||||||||||||||||
Sbjct: 384 ggtggtggtggtggtg 399
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 212
Length of database: 612
Length adjustment: 9
Effective length of query: 203
Effective length of database: 603
Effective search space: 122409
Effective search space used: 122409
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no527_d16.g1 MSMg01no527_d16.g1 CHROMAT_FILE:
MSMg01no527_d16.g1 PHD_FILE: MSMg01no527_d16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:24 2005
(659 letters)
>mm_chr16_81526939_81527998
Length = 1060
Score = 1261 bits (652), Expect = 0.0
Identities = 658/660 (99%), Gaps = 1/660 (0%)
Strand = Plus / Minus
Query: 1 actttccacatgcatcttgtctacaactgtcttttcatgaagagacacaattaagctttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 actttccacatgcatcttgtctacaactgtcttttcatgaagagacacaattaagctttc 801
Query: 61 tcttaaaattcttttatctatttattcttattaaagaatagatatcaatttatctatcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tcttaaaattcttttatctatttattcttattaaagaatagatatcaatttatctatcta 741
Query: 121 ttcttattaaagtagatggcttaaataactgcaaatgtagtacataaaaggtacctaacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ttcttattaaagtagatggcttaaataactgcaaatgtagtacataaaaggtacctaacc 681
Query: 181 tgccatatagacaattgtgtgtttgttaccgaaatctttaaaacaaaacttaactctctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tgccatatagacaattgtgtgtttgttaccgaaatctttaaaacaaaacttaactctctg 621
Query: 241 aaaactaaaacaagtagaaattgcagatctacattaaagttacttttaaataaaataaga 300
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 620 aaaactaaaacaagtagaaattgcagatctacattaaagttacttttaagtaaaataaga 561
Query: 301 aagtggctataatttctcaatcacccggcaagaaaag-aaaaaaaaatgaagaaaaataa 359
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 560 aagtggctataatttctcaatcacccggcaagaaaagaaaaaaaaaatgaagaaaaataa 501
Query: 360 gaaggtaatcatataggtacatcaatatcagacttactactcgaaatatatatcgaaata 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gaaggtaatcatataggtacatcaatatcagacttactactcgaaatatatatcgaaata 441
Query: 420 aataactcactttgaactccatgggagcgtactattttccaggtttctgatgccacttct 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aataactcactttgaactccatgggagcgtactattttccaggtttctgatgccacttct 381
Query: 480 ttgacatccacttgatagtgatgaataggcacacctccatgggattcgggtttattgaaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttgacatccacttgatagtgatgaataggcacacctccatgggattcgggtttattgaaa 321
Query: 540 gagatcttggctgtggtctgtgacagctctataatcttcactccatggggactagagggg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gagatcttggctgtggtctgtgacagctctataatcttcactccatggggactagagggg 261
Query: 600 acatctatgaaggaaacaacctagacagtgaggatggatactactaacaattattttgct 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 acatctatgaaggaaacaacctagacagtgaggatggatactactaacaattattttgct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1060
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1050
Effective search space: 681450
Effective search space used: 681450
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
