Query= MSMg01no527_m15.b1 MSMg01no527_m15.b1 CHROMAT_FILE:
MSMg01no527_m15.b1 PHD_FILE: MSMg01no527_m15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:11 2005
(704 letters)
>mm_chr16_5819801_5820904
Length = 1104
Score = 1265 bits (654), Expect = 0.0
Identities = 654/654 (100%)
Strand = Plus / Minus
Query: 51 gacatcacatccccaatggcttagccaccccaaatggacatgatctctggttttctatga 110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1104 gacatcacatccccaatggcttagccaccccaaatggacatgatctctggttttctatga 1045
Query: 111 ctgcctctcagtctcttcccccatcagtaaaaggaaactttagctaggtctaatgggtct 170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1044 ctgcctctcagtctcttcccccatcagtaaaaggaaactttagctaggtctaatgggtct 985
Query: 171 ggcaggtagtaccagctactggaggctgagtcaggggaattgcatgtacagtctgtctgg 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 984 ggcaggtagtaccagctactggaggctgagtcaggggaattgcatgtacagtctgtctgg 925
Query: 231 acaacggattacgttcaaggccagctggatagcttaatgggaccttgttttaaaataata 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 acaacggattacgttcaaggccagctggatagcttaatgggaccttgttttaaaataata 865
Query: 291 ggtaaaggaggtgctgagggaagggctgcagagatagttctgtcaggaaagagcttgcca 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 ggtaaaggaggtgctgagggaagggctgcagagatagttctgtcaggaaagagcttgcca 805
Query: 351 tgcaattatgaagagctgggttcaattcctaacatacggattgctgagatggttcagtgg 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tgcaattatgaagagctgggttcaattcctaacatacggattgctgagatggttcagtgg 745
Query: 411 ggtaaaaattcttgctactcaagcttgatgagctgagctgagatcctgagaacgcatata 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ggtaaaaattcttgctactcaagcttgatgagctgagctgagatcctgagaacgcatata 685
Query: 471 agagcttgcgatgccagctcacctctacaaggagagggaggcagaggcatgagcatcccc 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 agagcttgcgatgccagctcacctctacaaggagagggaggcagaggcatgagcatcccc 625
Query: 531 aggccagctaccctgatatgcacagcatttgaagctctcctgtctcagataaggtaaaag 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aggccagctaccctgatatgcacagcatttgaagctctcctgtctcagataaggtaaaag 565
Query: 591 agtaaaaactggcacccaaggttgttgtttaacttccacgtgtacaacatggaatgtatt 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agtaaaaactggcacccaaggttgttgtttaacttccacgtgtacaacatggaatgtatt 505
Query: 651 agcctgtaccaacatctctctctctctctctctctctctctctctctctctctc 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agcctgtaccaacatctctctctctctctctctctctctctctctctctctctc 451
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 64
Number of extensions: 24
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 1
Length of query: 704
Length of database: 1104
Length adjustment: 10
Effective length of query: 694
Effective length of database: 1094
Effective search space: 759236
Effective search space used: 759236
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no527_m15.g1 MSMg01no527_m15.g1 CHROMAT_FILE:
MSMg01no527_m15.g1 PHD_FILE: MSMg01no527_m15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:11 2005
(613 letters)
>mm_chr16_5688386_5689398
Length = 1013
Score = 1185 bits (613), Expect = 0.0
Identities = 613/613 (100%)
Strand = Plus / Plus
Query: 1 attaaagagcacagttgcatgggaggaagggcgctggaacagagttcagcagctcacatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attaaagagcacagttgcatgggaggaagggcgctggaacagagttcagcagctcacatg 260
Query: 61 gcctcactgtacaaagactcagactccgaagttacacaatgtggcctctcggtctcatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcctcactgtacaaagactcagactccgaagttacacaatgtggcctctcggtctcatgt 320
Query: 121 gtgcagtgtgggctcttctgcctcttttctatctgttgtatatagaacttctatatagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgcagtgtgggctcttctgcctcttttctatctgttgtatatagaacttctatatagaa 380
Query: 181 cttcatgcatcttgtgtctcattagcaccttaaatctccacccaggagcgtgcagagcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttcatgcatcttgtgtctcattagcaccttaaatctccacccaggagcgtgcagagcat 440
Query: 241 cacagattaccttcaggaattctggggtgcctcagcacctgtgtaaagtggccaaaactt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cacagattaccttcaggaattctggggtgcctcagcacctgtgtaaagtggccaaaactt 500
Query: 301 taactcattttagggtgaacctaggcttctttaccatcagctggttttattgaatgctaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taactcattttagggtgaacctaggcttctttaccatcagctggttttattgaatgctaa 560
Query: 361 tcttatagtcattacacagagtgtcactttccactccattctcctgcctcagacactgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcttatagtcattacacagagtgtcactttccactccattctcctgcctcagacactgtt 620
Query: 421 atgttacagtttctgtcaaaataaaatactgtagtttggagcgatgttctgtcagatgga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgttacagtttctgtcaaaataaaatactgtagtttggagcgatgttctgtcagatgga 680
Query: 481 ggatgtgtaaggggaagtgcaacattcctaccatgtgagaaagctgggtagtaaggctag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggatgtgtaaggggaagtgcaacattcctaccatgtgagaaagctgggtagtaaggctag 740
Query: 541 gaaaaatggactcaacagctccaggaagaccccccaaactaactgtattccctagactcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaaaaatggactcaacagctccaggaagaccccccaaactaactgtattccctagactcc 800
Query: 601 tcactccctatgc 613
|||||||||||||
Sbjct: 801 tcactccctatgc 813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1013
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1003
Effective search space: 604809
Effective search space used: 604809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
