| Query= MSMg01no528_a24.g1 MSMg01no528_a24.g1 CHROMAT_FILE:
MSMg01no528_a24.g1 PHD_FILE: MSMg01no528_a24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:33 2005
(189 letters)
>mm_chr16_79634641_79635229
Length = 589
Score = 342 bits (177), Expect = 6e-99
Identities = 186/189 (98%)
Strand = Plus / Minus
Query: 1 agtactgaagagtctaaaatgacacctttccacaggtaaattaggtacacttaattgtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 agtactgaagagtctaaaatgacacctttccacaggtaaattaggtacacttaattgtct 282
Query: 61 taattatggaaaaatactatctgcttttccagggagtgggacagagtctgtatgaaaatt 120
||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 281 taattatggaaaaataccatctgcttttccagggagcgggacagagtctgtatgaaaatt 222
Query: 121 tagaagttttccttctgaactacacacacacacacacacacacacacacacacacacata 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 221 tagaagttttccttctgaactacacacacacacacacacacacacacacacacacacaca 162
Query: 181 cacacacac 189
|||||||||
Sbjct: 161 cacacacac 153
Score = 85.8 bits (44), Expect = 2e-21
Identities = 44/44 (100%)
Strand = Plus / Minus
Query: 142 acacacacacacacacacacacacacacacacacacatacacac 185
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 acacacacacacacacacacacacacacacacacacatacacac 1
Score = 80.0 bits (41), Expect = 9e-20
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 144 acacacacacacacacacacacacacacacacacatacacacaca 188
||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 52 acacacacacacacacacacacacacacacacacacacacacaca 8
Score = 80.0 bits (41), Expect = 9e-20
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 142 acacacacacacacacacacacacacacacacacacatacacaca 186
||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 52 acacacacacacacacacacacacacacacacacacacacacaca 8
Score = 80.0 bits (41), Expect = 9e-20
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 141 tacacacacacacacacacacacacacacacacacacatacacacacac 189
|||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 57 tacaaacacacacacacacacacacacacacacacacacacacacacac 9
Score = 78.1 bits (40), Expect = 3e-19
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 142 acacacacacacacacacacacacacacacacacacatacacacacac 189
||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 48 acacacacacacacacacacacacacacacacacacacacatacacac 1
Score = 78.1 bits (40), Expect = 3e-19
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 142 acacacacacacacacacacacacacacacacacacatacacacacac 189
||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 50 acacacacacacacacacacacacacacacacacacacacacatacac 3
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 74
Number of extensions: 28
Number of successful extensions: 28
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 9
Length of query: 189
Length of database: 589
Length adjustment: 8
Effective length of query: 181
Effective length of database: 581
Effective search space: 105161
Effective search space used: 105161
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
