NNNAACTTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTTATTCCTGACTGATAGAAGTATAAGTTAGTCTACGTCTT
ATGGAAATCACCATGGTGCTTCCTCAAAAATTGAAAGTAAGGGCTGTAGA
GATTGTTCAACAATTAAGAACACTGCTCTCAAAAAATACCCAAGCCCACC
TTTGGCAGCTTAGAATCACCTATAAATTCAGATCTTAGGGATTTGATACC
TCTTAAACGGTGAGTACCTGCAGTTCCTGAACATTCACAAAGAGACTCAA
ATATATACATGTAATTTTAAAAATGCAAATAGAGATATCATATGATACAG
CTATGTCATATTTGAGTATACATTCAAAACATGAAACTCAGCATAATATA
GAGATGCTTATAAACCTCAGCTTATCACTGCAGTAGTCACAATAGACCAA
TTATGGAGTCAGCTGAGGTTTTCACTGCATGGATCAAATTAAATACTTGA
TTAATCTCTCTCTTTCTCACTCCCTCCCTCCTTCCCTACTTCCATAAATT
TTATCATTTCCACATAAATGGATAAAACTGGAGATCATCATTTTAGGGGA
AATAAATAGATTTTAAAATTTCATTAAATAACAGTTGGAGTAAAGAGGTC
ATGGAAGAAATAAAAGTAAGAACATGGAGTTTAAGGAACATTTCAGTTGT
TTTCAAGGAAGTTGATATTAGTTATGGATAAGATTAAAAAATAGTAAAA

NNCCCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAGAACTTT
TATCATGAATGGGTGTTGGATCTTGTCAAATGCTTTTTCTGCATCCAACG
AGATGATCATGTGGTTTTTGTCTTTGAGTTTGTTTATATAGTGGATTACA
TTGATGGATTTTCGTATATTAAACCATCCCTGCATTCCTGGAATAAAACC
TACTTGGTCAGGATGGATGATTGCTTTAATGTGTTCTTGGATTCGGTTAG
CGAGAATTTTATTGAGGATTTTTGCATCGATATTCATAAGAGAAATTGGT
CTGAAGTTCTCTATCTTTGTTGGATCTTTCTGTGGTTTAGGTATCAGAGT
AATAGTGGCTTCATAAAATGAGTTGGGTAGAGTACTTTCTACTTCTATCT
TGTGAAAAAGTTTGTGCAGAACTGGAATTAGATCTTCTTTGAAGGTCTGA
TAGAACTCTGCACTAAACCCGTCTGGTCCTGGGCTTTTTTTGGCTGGGAG
ACTATTTATAACTGCTTCTATTTCTTTAGGGGATATGGGACTGTTTAGAA
GGTCAACTTGATCCTGATTCAACTTTGGTACCTGGTATCTGTCCAGAAAT
TTGTCCATTTCGTCCAGGTTTTCCAGTTTTGTTGAGTATAGCCTTTTGTA
GAAGGATCTGATGGTGTTTTGGATTTCTTCANGATCTGTTGTTA

Query= MSMg01no528_h09.b1 MSMg01no528_h09.b1 CHROMAT_FILE:
MSMg01no528_h09.b1 PHD_FILE: MSMg01no528_h09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:04 2005
         (699 letters)



>mm_chr16_27356178_27357276
          Length = 1099

 Score = 1224 bits (633), Expect = 0.0
 Identities = 681/697 (97%), Gaps = 2/697 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcttattcctgactgatagaagtataagttagtctacgtcttatggaaatcacca 63
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttattcctgactgatagaagtttaagttagtctacgtcttatggaaatcacca 263

                                                                       
Query: 64  tggtgcttcctcaaaaattgaaagtaagggctgtagagattgttcaacaattaagaacac 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tggtgcttcctcaaaaattgaaagtaagggctgtagagattgttcaacaattaagaacac 323

                                                                       
Query: 124 tgctctcaaaaaatacccaagcccacctttggcagcttagaatcacctataaattcagat 183
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 324 tgctctcaaaaaatacccaagcccacctttggcagcttagaatcacgtataaattcagat 383

                                                                       
Query: 184 cttagggatttgatacctcttaaacggtgagtacctgcagttcctgaacattcacaaaga 243
           ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 384 cttagggatttgatacctcttaaactgtgagtacctgcagttcctgaacattcacagaga 443

                                                                       
Query: 244 gactcaaatatatacatgtaattttaaaaatgcaaatagagatatcatatgatacagcta 303
           ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 444 gactcaaatatatacatgtaatttttaaaacgcaaatagagatatcatatgatacagcta 503

                                                                       
Query: 304 tgtcatatttgagtatacattcaaaacatgaaactcagcataatatagagatgcttataa 363
           | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tatcatatctgagtatacattcaaaacatgaaactcagcataatatagagatgcttataa 563

                                                                       
Query: 364 acctcagcttatcactgcagtagtcacaatagaccaattatggagtcagctgaggttttc 423
           |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 564 acctcagcttctcactgcagtagtcaccatagaccaattatggagtcagctgaggttttc 623

                                                                       
Query: 424 actgcatggatcaaattaaata-cttgattaatctctctctttctcactccctccctcct 482
           |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 624 actgcatggatcaaattaaa-atcttgattaatctctctctttctcactccctccctcct 682

                                                                       
Query: 483 tccctacttccataaattttatcatttccacataaatggataaaactggagatcatcatt 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tccctacttccataaattttatcatttccacataaatggataaaactggagatcatcatt 742

                                                                       
Query: 543 ttaggggaaataaatagattttaaaatttcattaaataacagttggagtaaagaggtcat 602
           |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 743 ttagcggaaataaatagatttttaaatttcattaaataacagttggagtaaagaggtcct 802

                                                                       
Query: 603 ggaagaaataaaagtaagaacatggagtttaaggaacatttcagttgttttcaaggaagt 662
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 ggaagaaataaaactaagaacatggagtttaaggaacatttcagttgttttcaaggaagt 862

                                                
Query: 663 tgatattagttatggataagattaaaaaatagtaaaa 699
           |||||||||||||||||||||||||||||||||||||
Sbjct: 863 tgatattagttatggataagattaaaaaatagtaaaa 899


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 699
Length of database: 1099
Length adjustment: 10
Effective length of query: 689
Effective length of database: 1089
Effective search space:   750321
Effective search space used:   750321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)