TTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCCAAGATTGCCTCAGACACACAGAGTTTCAGGGCAGCCTGGGCT
ACACTAGACTCTGTGTCCAATAAGCATGTCAGCATATTTATTTTCCTGGA
CAGTATACTAGTCAAAGACCTGTCAGTAAGCTCTGGCTTTTGTTTCATAG
ATGTATTTAAGAGAAACGTGTGTTAAGTTCACCTGTGTCAACTAGAAACA
GCTAGTCAAGCTGATGTAGAAACAATACAGGAAAATAAATAGAAAAGTAG
AACGAAGCAGTATTGAGACTGAAGAAAAGGCATCATGAGGTAAAAGGCAC
AAATTTGAGATTGCTCTTAAAAACAGGGACAGAAGGTGAAATATCAGTTT
TGGTTAAGATCTGAACACCAAGCCAAAACCTGACAAGTCTTTTCTTATTT
TCTAGGAACTCACTATAGGTCAAAGGCGATGAACTTGACTTGGTTTCATA
TCCGGGGTAATTCAGCATTCAGACCCTGCAAATAATATTTGCTTACTGCT
ATTCAGTTGAGCTGGGATCGCTATCTGTCTCGAATTTGATGTTAACTGAA
GTCTCATTATTACAACTACCTTTTGTGCTACAAACCTACAAAGCTGGTGT
TGTGCAAAGGTGCTCAACACAACACAATGAAATGCTATAGCCATAGATCA
GTCCCTCACTCAGCCTTCATCAGAGAAACTGCTTCTTGCAGTANGTGATA
GGTAATTCAGAGAACCAN

NNAAGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAAACCAAATGGCT
GAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGAGAAATGCA
AATCAAAACAACCCTGAGATTCCATCTCACACCAGTCAGAATGGCTAAGA
TCAAAAATTCAGGTGCCAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGA
ACACTCCTTCATTTTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAA
ATCAGTCTGGCAGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATC
CTGCAATACCTCTTCTGGGTATATATCCAGAAGATGTTCCAACTGGTAAG
AAGGACACATGCTCGACTATGTTTGTAGCAGCCTTCTTTATAATAGCCAG
AAGCTATAAAGAACCCAGATGTCCCTCAACAGAGTAATGGATACAGAAAA
CGTGGTACATTTACACATTGGAGTACTACTCAGCTATTAAAAAGAATGAA
TTTATGAAATTCCTAGGCAAATGGATGGACCTGGAGGGCATCATCCTGAG
TGAGGTAACCCAATCACAAAGGAACTCACACAATATGTACTCACTTATAA
GTGGATATTATCCCAGAGACTTAGAATACCCAAGATACATGATACAATGT
GCAAAACACATGAAACTCCAGAGGACAAAAGAACAAAGGGGGGACTCTTT
GGCCCTTCTTAGAATTGGGAA

Query= MSMg01no528_o21.b1 MSMg01no528_o21.b1 CHROMAT_FILE:
MSMg01no528_o21.b1 PHD_FILE: MSMg01no528_o21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:41 2005
         (643 letters)



>mm_chr16_28307905_28308947
          Length = 1043

 Score = 1228 bits (635), Expect = 0.0
 Identities = 638/639 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccaagattgcctcagacacacagagtttcagggcagcctgggctacactagactc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaagattgcctcagacacacagagtttcagggcagcctgggctacactagactc 264

                                                                       
Query: 65  tgtgtccaataagcatgtcagcatatttattttcctggacagtatactagtcaaagacct 124
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 265 tgtgtccaataagcatgtcagcatatttattttcgtggacagtatactagtcaaagacct 324

                                                                       
Query: 125 gtcagtaagctctggcttttgtttcatagatgtatttaagagaaacgtgtgttaagttca 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtcagtaagctctggcttttgtttcatagatgtatttaagagaaacgtgtgttaagttca 384

                                                                       
Query: 185 cctgtgtcaactagaaacagctagtcaagctgatgtagaaacaatacaggaaaataaata 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cctgtgtcaactagaaacagctagtcaagctgatgtagaaacaatacaggaaaataaata 444

                                                                       
Query: 245 gaaaagtagaacgaagcagtattgagactgaagaaaaggcatcatgaggtaaaaggcaca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaaaagtagaacgaagcagtattgagactgaagaaaaggcatcatgaggtaaaaggcaca 504

                                                                       
Query: 305 aatttgagattgctcttaaaaacagggacagaaggtgaaatatcagttttggttaagatc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aatttgagattgctcttaaaaacagggacagaaggtgaaatatcagttttggttaagatc 564

                                                                       
Query: 365 tgaacaccaagccaaaacctgacaagtcttttcttattttctaggaactcactataggtc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgaacaccaagccaaaacctgacaagtcttttcttattttctaggaactcactataggtc 624

                                                                       
Query: 425 aaaggcgatgaacttgacttggtttcatatccggggtaattcagcattcagaccctgcaa 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaaggcgatgaacttgacttggtttcatatccggggtaattcagcattcagaccctgcaa 684

                                                                       
Query: 485 ataatatttgcttactgctattcagttgagctgggatcgctatctgtctcgaatttgatg 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ataatatttgcttactgctattcagttgagctgggatcgctatctgtctcgaatttgatg 744

                                                                       
Query: 545 ttaactgaagtctcattattacaactaccttttgtgctacaaacctacaaagctggtgtt 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttaactgaagtctcattattacaactaccttttgtgctacaaacctacaaagctggtgtt 804

                                                  
Query: 605 gtgcaaaggtgctcaacacaacacaatgaaatgctatag 643
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gtgcaaaggtgctcaacacaacacaatgaaatgctatag 843


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space:   653889
Effective search space used:   653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)