Query= MSMg01no529_e14.b1 MSMg01no529_e14.b1 CHROMAT_FILE:
MSMg01no529_e14.b1 PHD_FILE: MSMg01no529_e14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:11 2005
(637 letters)
>mm_chr16_56600693_56601728
Length = 1036
Score = 1154 bits (597), Expect = 0.0
Identities = 624/635 (98%), Gaps = 5/635 (0%)
Strand = Plus / Plus
Query: 5 gaattccatttcaattctgccctcttctctcatagctgtaacttcagagtcaaaggattt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatttcaattctgccctcttctctcatagctgtaacttcagagtcaaaggattt 264
Query: 65 tgattcagtacagcaagttgaggtggctgcttttcaaagctgtccaagcagcataacact 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgattcagtacagcaagttgaggtggctgcttttcaaagctgtccaagcagcataacact 324
Query: 125 tctagtatgtaggg--tttttcccccccctttctcctttttctttaccactcaactctca 182
|||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 325 tctagtatgtagggttttttt---ccccttttctcctttttctttaccactcaactctca 381
Query: 183 aaaagtatagaaatagaaatataggaagcaactgagctaacaagtatgttatttggatcc 242
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 382 aaaagtatagaaatagaaatataggaagcaactgagataacaagtgtgttatttggatcc 441
Query: 243 caagtatgttcaagaaaaagacttgaaagtaagagactcctaacaaatggaaatatgcag 302
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 caagtatgttcaagaaaaagacttgaaagtaagagactcctaacaaatggaaatatgcat 501
Query: 303 acatgaaccataattactagaggatagcaaagtattctattcctagtgatgcctctagtg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 acatgaaccataattactagaggatagcaaagtattctattcctagtgatgcctctagtg 561
Query: 363 atgacttacagaagttgtcagccttgcttagaacctagaagtgtgaatataagaagtaag 422
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 562 atgacttacagaagttgtcagccttgcttggaacctagaagtgtgaatataagaagtaag 621
Query: 423 gttaattaataaatacccattcgaataaaaatacagactgcagaaaaattgatctaacat 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gttaattaataaatacccattcgaataaaaatacagactgcagaaaaattgatctaacat 681
Query: 483 atgcaattgaaaggggatttgggacttaccataaatgcagccatggtattaatttgcaat 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 atgcaattgaaaggggatttgggacttaccataaatgcagccatggtattaatttgcaat 741
Query: 543 ttcacaagttgagaggagtatgtctaaattgatgacatttcctatcatttagagggggac 602
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 ttcacaagttgagaggagtatgtctaaattgatgacatttcctatcatttagagggggag 801
Query: 603 agagctgatgtcactagaagcttgacttgaacctt 637
|||||||||||||||||||||||||||||||||||
Sbjct: 802 agagctgatgtcactagaagcttgacttgaacctt 836
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1036
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1026
Effective search space: 643302
Effective search space used: 643302
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no529_e14.g1 MSMg01no529_e14.g1 CHROMAT_FILE:
MSMg01no529_e14.g1 PHD_FILE: MSMg01no529_e14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:11 2005
(690 letters)
>mm_chr16_56766565_56767654
Length = 1090
Score = 1334 bits (690), Expect = 0.0
Identities = 690/690 (100%)
Strand = Plus / Minus
Query: 1 caacccccccttcctttgcttttgcttattaaggccatgtacttgattatttttgattat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 890 caacccccccttcctttgcttttgcttattaaggccatgtacttgattatttttgattat 831
Query: 61 gtatgtatacccaccaaatcatatttagttacagaggcctatcattaaaatacagtttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 gtatgtatacccaccaaatcatatttagttacagaggcctatcattaaaatacagtttta 771
Query: 121 aacctatttttacatttaatcttgcttactgcagaaaaatgagcaaatacataatgggca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 aacctatttttacatttaatcttgcttactgcagaaaaatgagcaaatacataatgggca 711
Query: 181 aattctttgaaattatttacctcaattgtttagaatatactccaaatattttctttctgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 aattctttgaaattatttacctcaattgtttagaatatactccaaatattttctttctgt 651
Query: 241 atataagtttatgcactcatacataagtaactacataatgtgttaacctattgtcattta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 atataagtttatgcactcatacataagtaactacataatgtgttaacctattgtcattta 591
Query: 301 ctaccttaaaaccttttaaaagctatgactatgtatacatgcacataattttatattatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 ctaccttaaaaccttttaaaagctatgactatgtatacatgcacataattttatattatt 531
Query: 361 gcatcctacttagagtccactggcagagaagcacagcaggatgacgatgtactacaaagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 gcatcctacttagagtccactggcagagaagcacagcaggatgacgatgtactacaaagg 471
Query: 421 ggtatttattggattgacttatacaatttggggcacaacaacagctatgtgcacactata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ggtatttattggattgacttatacaatttggggcacaacaacagctatgtgcacactata 411
Query: 481 gaggctaggtcagtagctgctcagaattcaaggatggatgcctcagtcgtccttccgaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gaggctaggtcagtagctgctcagaattcaaggatggatgcctcagtcgtccttccgaag 351
Query: 541 gcctaaatgatttctggagaaccacgaccttcagctcaattggaaggtctaagaagttgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gcctaaatgatttctggagaaccacgaccttcagctcaattggaaggtctaagaagttgg 291
Query: 601 gttttaatatccgcacaaaatggcagcagcaacaaccaagcaggctcattccctgcaaac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gttttaatatccgcacaaaatggcagcagcaacaaccaagcaggctcattccctgcaaac 231
Query: 661 cgaggaagacaaccaagctcactgccttgc 690
||||||||||||||||||||||||||||||
Sbjct: 230 cgaggaagacaaccaagctcactgccttgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1090
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1080
Effective search space: 734400
Effective search space used: 734400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
