NNNTTCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCACAGTAAATAAAAATAACAAAAAAAGATAAATGGATATA
AATAGGCATGATACAAATTGCCAGTTCTATGTTAAACATTTATAAATTAC
AAATAAGCATCATATCTCATATTTTAATAACCTATTCTCTTTTTAACCAC
CAAACAGCTTTTTTAAGTTCAGTGATTGAAACCTTCAAGTCCTAAAATAA
GTTTTAATCAGGGATTTTAACACATATTTAGAAGTAGCATGCACACATTT
ATAAAATGCTTTTTGATGTTTTACTACATGGATGCATTCTGTTATTTATA
ATTGCCTTTTGTCAGGTGTATAGCTTGCATTGATTTCCATTTCATTACCT
CAATTTTTTTTTCTTTTCAGTTGACTGAATGCAATTCTTTCTGTCTCTCT
TTGCTTCTGTTTGCCATGTTTCTGGAAGATGCTTCAAAAGCCCTTTATTG
GTGCTTGCCTATGGCATGGGACTCAAGTTATTGGTTGGACATTATCTCAC
TCCCTGCTCCATCTTTGTCTTTGCATTTCTTTCAGACAGGACAAATTTTG
GGTCAAAGGTGTTTTGGGTGAGTTGGTATCCTTATCCCTTACTCGGGGGT
CCTGCCTGGCTAAAGGACATGTCCTCTTCAGGTTCCTTATCTCCACTGTT
ATGCATCTTGGCTACCTTGACAGGACTCAGTGGGAGAAN

AACCCCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTCAGTTCTGA
GCCCCATTTTTTAATGCCCCTCCTTAGAAGTGGGAACAAAACACCCTTGG
AAGGAGTTACAGATACAAAGTTTGGAGCTGAGATGAAAGGATGGTCCATG
TAGAGACTTCCATATCCAGGGATCCACCCCATAATCAGTATCCAAACGCT
GACACCATTGCATACACTAGCAAGATTTTATCAAAAGGACCCAGATGTAG
CTGTCTCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAGTGGATGC
TCACAGTCAGCTAATGGATGGATCACAGGGCTCCCAATGGAGGAGCTAAA
GAAAGTAGCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGCGGAACAAC
ATTATGAACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGTA
TCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACG
CGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAAAGGGG
GAGTGGGTGGGTAGGGGTATTGGGGNGTAGCCTTTTTCCTTTCTCTCTTT
TTGTTTTTCTGTTCTTTTTCTTTGTTTTTTTTTTGCTTTTTGTCTGCTCG
CCCTTCTCCGCTTTTTTTTTTTTTTTTTTTTG

Query= MSMg01no529_m02.b1 MSMg01no529_m02.b1 CHROMAT_FILE:
MSMg01no529_m02.b1 PHD_FILE: MSMg01no529_m02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:51 2005
         (682 letters)



>mm_chr16_82906503_82907584
          Length = 1082

 Score = 1156 bits (598), Expect = 0.0
 Identities = 630/646 (97%), Gaps = 11/646 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcacagtaaataaaaataacaaaaaaagataaatggatataaataggcatgataca 64
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 gaattcacagtaaa-aaaaataacaaaaaaagataaatggatataaataggcatgataca 587

                                                                       
Query: 65  aattgccagttctatgttaaacatttataaattacaaataagcatcatatctcatatttt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 aattgccagttctatgttaaacatttataaattacaaataagcatcatatctcatatttt 527

                                                                       
Query: 125 aataacctattctctttttaaccaccaaacagcttttttaagttcagtgattgaaacctt 184
           |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 526 aataacctattctctttttagccaccaaacagcttttttaagttcaatgattgaaacctt 467

                                                                       
Query: 185 caagtcctaaaataagttttaatcagggattttaacacatatttagaagtagcatgcaca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 caagtcctaaaataagttttaatcagggattttaacacatatttagaagtagcatgcaca 407

                                                                       
Query: 245 catttataaaatgctttttgatgttttactacatggatgcattctgttatttataattgc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 catttataaaatgctttttgatgttttactacatggatgcattctgttatttataattgc 347

                                                                       
Query: 305 cttttgtcaggtgtatagcttgcattgatttccatttcattacctcaattttttttt-ct 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 346 cttttgtcaggtgtatagcttgcattgatttccatttcattacctcaattttttttttct 287

                                                                       
Query: 364 tttcagttgactgaatgcaattctttctgtctctctttgcttctgtttgccatgtttctg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 tttcagttgactgaatgcaattctttctgtctctctttgcttctgtttgccatgtttctg 227

                                                                       
Query: 424 gaagatgcttcaaaagccctttattggtgcttgcctatggcatgggactcaagtt----- 478
           ||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
Sbjct: 226 gaagacgcttcaaaagccctttattggtgcttgcctatggcatgggactcaagttggggc 167

                                                                       
Query: 479 ----attggttggacattatctcactccctgctccatctttgtctttgcatttctttcag 534
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 agttattggttggacattatctcactccctgctccatctttgtctttgcatttctttcag 107

                                                                       
Query: 535 acaggacaaattttgggtcaaaggtgttttgggtgagttggtatccttatcccttactcg 594
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 106 acaggacaaattttgggtcaaaggtgttttgggtgagttggtatccttatcccttacttg 47

                                                         
Query: 595 ggggtcctgcctggctaaaggacatgtcctcttcaggttccttatc 640
           ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 46  ggggtcctgcctggctaaaggacctgtcctcttcaggttccttatc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 682
Length of database: 1082
Length adjustment: 10
Effective length of query: 672
Effective length of database: 1072
Effective search space:   720384
Effective search space used:   720384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)