Query= MSMg01no530_a09.b1 MSMg01no530_a09.b1 CHROMAT_FILE:
MSMg01no530_a09.b1 PHD_FILE: MSMg01no530_a09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:12 2005
(532 letters)
>mm_chr16_25199299_25200231
Length = 933
Score = 899 bits (465), Expect = 0.0
Identities = 512/537 (95%), Gaps = 19/537 (3%)
Strand = Plus / Minus
Query: 1 tactgtagaaggagattaatttacttagaaataaaaccaagtggaactgtaaaaatttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 tactgtagaaggagattaatttacttagaaataaaaccaagtggaactgtaaaaatttaa 475
Query: 61 ttttactaatgtccttgggcagatttctgattgcgttcatatgtgctgtgttatttccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ttttactaatgtccttgggcagatttctgattgcgttcatatgtgctgtgttatttccaa 415
Query: 121 agcttttatcctgctccttcaaaaacctcagaactcaacctgtccttcaagacttagtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 agcttttatcctgctccttcaaaaacctcagaactcaacctgtccttcaagacttagtct 355
Query: 181 tttgtccggtttaggagccctcactggcccatctccagtttgctctccttctcctccctc 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 354 tttgtccggtttaggagccctcactggcccatctccagtttgctccccttctcctccctc 295
Query: 241 tacagaaccatcatggaaagacacttctgtgcattctagagcagcatgggaagtctcaag 300
|||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 294 tacagaaccaccagggaaagacgcttctgtgcattctagagcagcatgggaagtctcaag 235
Query: 301 gggaagagaaa-ggggagctcgtgtgagtacatctgtgtgtgtgtgtgtg--tgtgtgtg 357
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 234 gggaagagaaagggggagctcgtgtgagtacatctgtgtgtgtgtgtgtgcatgtgtctg 175
Query: 358 tgtgtgtgtgtgtgtgtgtgcatgtgtctgtgtgtgtctgtgttcatgtctttctgtgtg 417
|||||| || | ||||||||||||||||||||||||||||||||||||
Sbjct: 174 tgtgtgagt------------a--tgtctgtgtgtgtctgtgttcatgtctttctgtgtg 129
Query: 418 tgcatgtgtgtatgtctgtgtatatgtgtgcatgtctcta--tgtgtgtgtgtgtgtgtg 475
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 128 tgcatgtgtgtatgtctgtgtatatgtgtgcatgtctctatgtgtgtgtgtgtgtgtgtg 69
Query: 476 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcacttgtgtgtgttctgcttggctg 532
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcacttgtgtgtgttctgcttggctg 12
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 235
Number of extensions: 48
Number of successful extensions: 48
Number of sequences better than 10.0: 1
Number of HSP's gapped: 37
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 933
Length adjustment: 10
Effective length of query: 522
Effective length of database: 923
Effective search space: 481806
Effective search space used: 481806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no530_a09.g1 MSMg01no530_a09.g1 CHROMAT_FILE:
MSMg01no530_a09.g1 PHD_FILE: MSMg01no530_a09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:12 2005
(628 letters)
>mm_chr16_25015230_25016257
Length = 1028
Score = 1151 bits (595), Expect = 0.0
Identities = 624/639 (97%), Gaps = 11/639 (1%)
Strand = Plus / Plus
Query: 1 atagttcctttcatcacatggaccttatgctttcatttgagaaatgaaaagttctttgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atagttcctttcatcacatggaccttatgctttcatttgagaaatgaaaagttctttgct 260
Query: 61 ttctgttgccctgggatttttgtcctgtctattccttttctcttctgccatctttggtag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctgttgccctgggatttttgtcctgtctattccttttctcttctgccatctttggtag 320
Query: 121 cttctgctcttccttcagactgaacttaaatgtggctcccttgtaactcttattttatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttctgctcttccttcagactgaacttaaatgtggctcccttgtaactcttattttatgg 380
Query: 181 gatcccattgttatttgttctagtctggatccctctaaaaccccatttgttcaagtctta 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 gatcccattgttatttgttctagtctggatccctctgaaaccccatttgttcaagtctta 440
Query: 241 actgaaagcaagcttactccgtgtaaacgatcatacctggaggattctgactctacacgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actgaaagcaagcttactccgtgtaaacgatcatacctggaggattctgactctacacgg 500
Query: 301 agtggtcagatgacccagcacaatttataattgggaggtggtggaaacttactgggtcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtggtcagatgacccagcacaatttataattgggaggtggtggaaacttactgggtcac 560
Query: 361 aagggaaagccaatgagaagcttgttttcttcctgctttccacccagccttgctgtccca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagggaaagccaatgagaagcttgttttcttcctgctttccacccagccttgctgtccca 620
Query: 421 ttggtgtgcccaccatgcccctctgccttaccataggcatggactgaaacttcataaact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttggtgtgcccaccatgcccctctgccttaccataggcatggactgaaacttcataaact 680
Query: 481 ctgagttgattttcacaagtgttttgccacagtgacagacagctggctagcacagctctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctgagttgattttcacaagtgttttgccacagtgacagacagctggctagcacagctctg 740
Query: 541 agcttttttttttt---ttt-------taactttttgatg-aaaaaaaaatgctgctaga 589
|||||||||||||| | | || |||||||||| |||||||||||||| ||||
Sbjct: 741 agctttttttttttaactgtagctccatacctttttgatggaaaaaaaaatgctgttaga 800
Query: 590 tgtgtctatggctttgtctgccccagtcatctatgagga 628
|||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tgtgtctatggctttgtctgccccagtcatctatgagga 839
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space: 629124
Effective search space used: 629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
