NCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTGGAATTGTTTTTCTCTGGGCTCGGCCAATAGGCATTTAAGTTTCT
TTGAAACGACACTTGACTAGGCATATAAAACAAAAAACATTAGCTGATTC
CTGGGAGAGTCTAGATTTAAAACCTGGTGAGGGCTGGTGAGATGACTCAG
TGGGTAAGAGCACCCGACTGCTCTTCCGAAAGTCCGAAGTTCAAATCCCA
GCAACCACATGGTGGCTCACAACCACCCATAATGAGATCTGACTCCCTCT
TCTAGAGTGTCTGAAGACAGCTACAGTGTACTTACATATAATCAATCAAT
CAATCAATCAATCAATCAATCAATCAATCAACCAATCAATCAATCTTAAA
AAAAAAAACCTAGTGAATGCATACATGGAAATACGCTGCATCTTTAAATA
GAAGCTCTGAGAAGCTGAGCAGTAAAGATTGTGCTTCATGAACACAAAAT
GACACACCCTGGAGAAAGGCTCTTTGAATGAAGGCGACTGACACTGAACG
TCTGTGCATGGTATGGGGTTTGGTAACACCTGCCTGGAGTCTAGTACTAG
GAAGCAGAAGCAGAATGTCAAAGCCAGCCTCAGATGCCAAGCAAGCTCCA
AGCCGATCTGGGCCAGTGTAATCCCGTCTCAGAAACAACCGAGTAGGCTA
ATATCACCAGCTCCTTTGTTCCTACCTGGGCCACCAAGGGCTTCGCTCTC
CTTATTTTCTGCTTCG

ACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCTTACTTGCCTTGGTGTAGTTACAGT
CTTTTTCTGGCTTCTTTTAGCCACTGTTTCCCACCTCGGAGGGTGTATCT
CAAATAAGTAACTTCAGTCTGACACAGCTGAGCCTTTTTAGCTGAGGCTC
TGTCTTCTGTTGCCCAGATTTCCTGTCTAGATCTTGTCTTTTTCTTTCTC
TCCTATCACTGAGGCCAAGATTCTAGTCAAATTTCTCTCTTGTCTATGAT
CCCTCTCGTCTTCTCTTTCTTCTGCCTCTCGCCCCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
TAATACGCCTTCTCTGCCTCTTACTTACTGGTTCTACTCTAAATATTTCT
CATTTGGGTATCTCTCTCATCTCAGACCTCTCTAATCTCTTTCATCTCTA
TTTTCACTTCTCCTCACTGCTATCCTCCCTATTTGCTACTGTCATCCATC
TCTCCTGAGTCTGCTGAAGCTTTGCTCTTCCTTACAGTCTAAGCTCACCT
TTTTCTAGACCTCTATACACATTTGTCAGAGCCTGGTGATTAGACTCATA
GGAGCTCCTTACCTGGGACAGAAGTTTTAAGTGAGCGGATGTCTGGATGT
CTCCCTCGCTGGGTAGCAGCTTAAGACGGGCAGCCCTAGAAGAGAAACAC
GTGGGGCAGGGAAAG

Query= MSMg01no530_l01.b1 MSMg01no530_l01.b1 CHROMAT_FILE:
MSMg01no530_l01.b1 PHD_FILE: MSMg01no530_l01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:06 2005
         (720 letters)



>mm_chr16_13127150_13128269
          Length = 1120

 Score =  891 bits (461), Expect = 0.0
 Identities = 537/577 (93%), Gaps = 25/577 (4%)
 Strand = Plus / Minus

                                                                        
Query: 144  agatgactcagtgggtaagagcacccgactgctcttccgaaagtccgaagttcaaatccc 203
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1120 agatggctcagtgggtaagagcacccgactgctcttccgaaagtccgaagttcaaatccc 1061

                                                                        
Query: 204  agcaaccacatggtggctcacaaccacccataatgagatctgactccctcttctagagtg 263
            |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 1060 agcaaccacatggtggctcacaaccatccataatgagatctgactccctcttctggagtg 1001

                                                                        
Query: 264  tctgaagacagctacagtgtacttacatataatcaatcaatcaatcaatcaatcaatcaa 323
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 1000 tctgaagacagctacagtgtacttacatataatcaatcaatcaatcaatcaatcaatc-- 943

                                                                        
Query: 324  tcaatcaatcaaccaatcaatcaatcttaaaaaaaaaaacctagtgaatgcatacatgga 383
                            |   | ||    |||||||||||||| | |||||||||||||||
Sbjct: 942  ----------------t---taaa----aaaaaaaaaaacctggagaatgcatacatgga 906

                                                                        
Query: 384  aatacgctgcatctttaaatagaagctctgagaagctgagcagtaaagattgtgcttcat 443
            |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 905  aatacgctgcatctttaaatagaagccccgagaagctgagcagtaaagattgtgcttcat 846

                                                                        
Query: 444  gaacacaaaatgacacaccctggagaaaggctctttgaatgaaggcgactgacactgaac 503
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 845  gaacacaaaatgacacaccctggagaaaggctctttgaatgaaggcgactgacattgaac 786

                                                                        
Query: 504  gtctgtgcatggtatggggtttggtaacacctgcctggagtctagtactaggaagcagaa 563
            ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785  gtctgtgcacggtgtggggtttggtaacacctgcctggagtctagtactaggaagcagaa 726

                                                                        
Query: 564  gcagaatgtcaaagccagcctcagatgccaagcaagctccaagccgatctgggccagtgt 623
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 725  gcagaatgtcaaagccagcctcagatgctaagcaagctccaagccgatctgggccagtgt 666

                                                                        
Query: 624  aatcccgtctcagaaacaaccgagtaggctaatatcaccagctcctttgttcctacctgg 683
            ||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 665  aatcctgtctcagaaacaacagagtaggctaatgtcaccagctcctttgttcctacctgg 606

                                                 
Query: 684  gccaccaagggcttcgctctccttattttctgcttcg 720
            |||||||||||||||||||||||||||||||||||||
Sbjct: 605  gccaccaagggcttcgctctccttattttctgcttcg 569


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 720
Length of database: 1120
Length adjustment: 10
Effective length of query: 710
Effective length of database: 1110
Effective search space:   788100
Effective search space used:   788100
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)