ACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCATATCTTAAATCTCAATCTAACGCTGTAATAATAAGAGATGGGGC
CTTGAGGAACTGATAATCACCCCTCCCCGCCCCCGAATGCCATTAGTGTC
TTAATAAAAGAGGCCCAAGAGAGCAGAGAGGACACTTGTCTCTTCCTACC
CTGGAAGGGTGTAAAAAGAAGATGGGTCTATAAAGCGGAGACTGAGCCTG
TACCACACACAGGATCTGCTGGCAACTTGGTCTGAGACTTTTTCTACTCT
AGAGCTGTAAGAAATAAATTTCTTCTGTTTATAAATTGCCCAATTTCGTT
CTATCAGCTGGGAAAGCCTGAAAAGGCCATTTTCTGACTTTTTTACTCTT
TCTCAATATCACTGCAGACTACTTCCCCCAGTTAGGCCTGTCTGACTTCA
CAAGAGAGAAAAAAAAATCATGTTGCAACACAGCAATATAAGTAAAAAGT
AGACAGACCCTGAACAACCAAAAACTGGTTGGTGAGTATACTGTAAACAC
AATAGTAAAAGTTTTCAAGTGAAATGGAGTGTAATCAAAGCAAACTCATA
GATTTTATGTGACTCATCTTGGCGAAGAGAAAAAAAGGCATAAACACAAG
CTGCGACTGAGAGGTGGTGATTTTATCTTAGGGGTCTCAAGGGGTCTTCT
CCTGAAGATCAACTCATAGTAGACAGCTTCCAAATAGAATACACTCCTAT
TACATATGGATAGACCTAA

NCCAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCAAATGCCT
GAGAAGCACCTGAAAAATGTTCAGCATCCTTAATCATCAGGGAAATGCAA
ATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGAT
CAAAAACTCAGGTGACAGCAGATTGTGGGACGCCCGACTTGCCAGCAAGT
AAGATGCCACAACAGGATCCTTCTGCAACACGTTTATTGGGAGAGCATGG
ACTGTGTAGGCGAAAGACCCCAAGACCCAGAAATGGCGCTGGTTATATAG
GCCTAGGAGTGACGTGTCCATACCTGATTGGTTATGCTACCAGTACCTCA
TTAATATTCATTGGGCCAGGCAGTGACTCTGCAAAAAAACTCTTATGCAC
ATGCGCACATTGGTTGTTTACCCATATTCATGGGCGTCGGCTTAAAGAAA
CCAGCGCCATCTTGTAATGGCATTTGTGGCTTCCCACAGCAGATGCTGGC
AATGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAAG
CTTGTAAACCACTCTGGAAATCAGTCTGGCAGATCCTCAGAAAATTGGAC
ATAGTACTACCGGAGGATCCAGCAATACATCTCCTGGGCATATATCCAGA
AGATGTTTCAACTGGTAAGGAGGACACATGCTCCACTATGATCATAGCAG
CCTTATTTATAATATCCA

Query= MSMg01no530_o11.b1 MSMg01no530_o11.b1 CHROMAT_FILE:
MSMg01no530_o11.b1 PHD_FILE: MSMg01no530_o11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:22 2005
         (699 letters)



>mm_chr16_42072212_42073311
          Length = 1100

 Score = 1110 bits (574), Expect = 0.0
 Identities = 592/598 (98%), Gaps = 3/598 (0%)
 Strand = Plus / Minus

                                                                        
Query: 104  cagagaggacacttgtctcttcctaccctggaagggtgtaaaaagaagatgggtctataa 163
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1100 cagagaggacacttgtctcttcctaccctggaagggtgtaaaaagaagatgggtctataa 1041

                                                                        
Query: 164  agcggagactgagcctgtaccacacacaggatctgctggcaacttggtctgagacttttt 223
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1040 agcggagactgagcctgtaccacacacaggatctgctggcaacttggtctgagacttttt 981

                                                                        
Query: 224  ctactctagagctgtaagaaataaatttcttctgtttataaattgcccaatttcgttcta 283
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980  ctactctagagctgtaagaaataaatttcttctgtttataaattgcccaatttcgttcta 921

                                                                        
Query: 284  tcagctgggaaagcctgaaaaggccattttctgacttttttactctttctcaatatcact 343
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920  tcagctgggaaagcctgaaaaggccattttctgacttttttactctttctcaatatcact 861

                                                                        
Query: 344  gcagactacttcccccagttaggcctgtctgacttcacaagagag-aaaaaaaaatcatg 402
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 860  gcagactacttcccccagttaggcctgtctgacttcacaagagagaaaaaaaaaatcatg 801

                                                                        
Query: 403  ttgcaacacagcaatataagtaaaaagtagacagaccctgaacaaccaaaaactggttgg 462
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800  ttgcagcacagcaatataagtaaaaagtagacagaccctgaacaaccaaaaactggttgg 741

                                                                        
Query: 463  tgagtatactgtaaacacaatagtaaaagttttcaagtgaaatggagtgtaatcaaagca 522
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 740  tgagtatactgtaaacacaatagtaaaagttttcaagtgaaatggagtataatcaaagca 681

                                                                        
Query: 523  aactcatagattttatgtgactcatcttggcgaagagaaaaaaaggcataaacacaagct 582
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 680  aactcatagattttatgtgactcatcttggcgaagag-aaaaaaggcataaacacaagct 622

                                                                        
Query: 583  gcgactgagaggtggtgattttatcttaggggtctcaaggggtcttctcctgaagatcaa 642
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621  gcgactgagaggtggtgattttatcttaggggtctcaaggggtcttctcctgaagatcaa 562

                                                                      
Query: 643  ctc-atagtagacagcttccaaatagaatacactcctattacatatggatagacctaa 699
            ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 561  ctcgatagtagacagcttccaaatagaatacactcctattatatatggatagacctaa 504


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 699
Length of database: 1100
Length adjustment: 10
Effective length of query: 689
Effective length of database: 1090
Effective search space:   751010
Effective search space used:   751010
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)