Query= MSMg01no531_g06.b1 MSMg01no531_g06.b1 CHROMAT_FILE:
MSMg01no531_g06.b1 PHD_FILE: MSMg01no531_g06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:00 2005
(588 letters)
>mm_chr16_79024495_79025482
Length = 988
Score = 1060 bits (548), Expect = 0.0
Identities = 578/588 (98%)
Strand = Plus / Minus
Query: 1 aattaatgatgcaagtccagagttgagtgattttcaaaaacaatttactatggcagagtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 aattaatgatgcaagtccagagttgagtgattttcaaaaacaatttactatggcagagtc 729
Query: 61 atccattctggacgcgagtctagtatgtcttccagtgtgcaaagaatgcatgtcctatag 120
||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 728 atccattctggacgcaagtctagtatctcttccagtgtgcaaagaatgcatgtcctatag 669
Query: 121 ttcatttttaaatgtttttgtcctttaaacaggtaaaagttcttgttgttctttacagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 ttcatttttaaatgtttttgtcctttaaacaggtaaaagttcttgttgttctttacagga 609
Query: 181 ttttacatttctacaccaactgaacagggatggagaagcgaaagagtaggcctttcaagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 ttttacatttctacaccaactgaacagggatggagaagcgaaagagtaggcctttcaagc 549
Query: 241 ctctctttatacctcacttcagagcctgtctgccttcatttttggtaagtttccagtcag 300
||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 548 ctctctttagacctcacttcagagcctgtctgccttcatttttggtacgtttccagtcag 489
Query: 301 tctcttagcttttttttggtaggaaatatttaaatgccttctctgtaaatgtttaggtag 360
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 488 tctcttagcttttttttggtaggaaatatttaaatgccgtctctgtaaatgtttaggtag 429
Query: 361 caaggcttttgctagggaagcaggctcatatttcactatgattttggctaaagtatttgc 420
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 caaggcttttgttagggaagcaggctcatatttcactatgattttggctaaagtatttgc 369
Query: 421 taatgcataattttttaagtgatagaagagcaaagtgttagtagaacacaaaccctctgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 taatgcataattttttaagtgatagaagagcaaagtgttagtagaacacaaaccctctgc 309
Query: 481 ccgagaaacacccaaagaaaacgaggataatttaaatacaataaaagatgttaaaagaac 540
| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 308 ctgagaaacacccaaagaaaacgaggataatttaaatacaagaaaagatgtaaaaagaac 249
Query: 541 cagataaatgtattcaatacgttaggcatctaaacatctttgcttatt 588
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tagataaatgtattcaatacgttaggcatctaaacatctttgcttatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 988
Length adjustment: 10
Effective length of query: 578
Effective length of database: 978
Effective search space: 565284
Effective search space used: 565284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no531_g06.g1 MSMg01no531_g06.g1 CHROMAT_FILE:
MSMg01no531_g06.g1 PHD_FILE: MSMg01no531_g06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:00 2005
(495 letters)
>mm_chr16_78838222_78839116
Length = 895
Score = 928 bits (480), Expect = 0.0
Identities = 492/496 (99%), Gaps = 1/496 (0%)
Strand = Plus / Plus
Query: 1 aaatgataccaatactgatcaattttaaattagaaaacagattatcaagccaacttagtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatgataccaatactgatcaattttaaattagaaaacagattatcaagccaacttagtc 260
Query: 61 actcttcccaaggttgaccatccctttgggctcctttgggggtaacctgcccttccttag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actcttcccaaggttgaccatccctttgggctcctttgggggtaacctgcccttccttag 320
Query: 121 cccaacatcatagaaaaatgtggaatttattatggacacaggaaggaagaaagaaagagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccaacatcatagaaaaatgtggaatttattatggacacaggaaggaagaaagaaagagg 380
Query: 181 aaggaagaaagggaaggaaagaaggaacagagggagggatggaggaagggaagaagggag 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaggaagagagggaaggaaagaaggaacagagggagggatggaggaagggaagaagggag 440
Query: 241 aagataccagggcaactgccccttctcagcttctaatgagaaacacaatgtgactgcatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagataccagggcaactgccccttctcagcttctaatgagaaacacaatgtgactgcatg 500
Query: 301 gtttcccacctgtatatcaaggacagtagtctcttata-catcctcatgaataatttgaa 359
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 501 gtttcccacctgtatatcaaggacagtagtctcttataacatcctcatgaataatttgaa 560
Query: 360 aatgacaaaacaaaagggaagagctttgaaggttttcaggaagttatgaggtataacagc 419
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 561 aatgacaaaacaaaagggaagagctttgaaggttttcgggaagttatgaggtataacagc 620
Query: 420 aaggtcattgagtttaggggaacaatgttccttacatacctcttcaattagaacaggtct 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 621 aaggtcattgagtttaggggaacaatgttccttacatacctcttcaattagaacaagtct 680
Query: 480 cacagagcttatttgc 495
||||||||||||||||
Sbjct: 681 cacagagcttatttgc 696
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 895
Length adjustment: 10
Effective length of query: 485
Effective length of database: 885
Effective search space: 429225
Effective search space used: 429225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
