NCCTACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTGCAGGACTCTCGAGACAAAGCAATTAGACTGTGGCCGG
AAGAGGAATAAAACTTAAAAGTAAAAACACCGACAGATGTGGTAATAACA
CACACCTTTAGTCCCTACACTTTGGAGGGCTGAGGGGCCAGTGGATCTCA
GTTTGAGGCTAGCCTTGTCTACAGAGCCAGTTCCAGGATAGTCAGGACCA
CATAGAGAAACTTTGTCTCAAAACGAAACAAAAATAAACAAATAAATACC
ACAAAGAGTGAAAACTCCAGCTCTTATGTTCCTTTTCCAGGAAGGCTGTC
ATTTGGAGGGTCAACATTTACTAAGACCTTTCTGTTGTCACTTTTGGTTT
CAACAAAGGAAGTTTCAGTGGCACTGGCCTCCTTAATCCAATTGCTAAAT
CCACCATTCTGTCCTCAGCATTTGATTTTGTCTCCATGGAGATCACTTCA
GGGAAATCTTTAGTAAGGTGAGTAGCAGTTTTCAGTGTGAGAAAGAAAGC
ACTGGATGAGTGCTTCAGGGCCACAAATGTTAGCAAACATTAACATTAGC
TGGGGCTGGGGCTGGAGCTGGGGCTGGGGCTGGGGCTGGGGCTGGGGCTG
GGGCTGGGGCTGGGGCTGGGGCTGGNGCTGGGACTGTAGCTCTGTGGGCA
TTGTGCTTACATGTGTGAGACCTGAGTTCAGCTCCCA

NNNNCCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTCTTTCCTCCTTCACTGG
GTTTTAACAGGCCCAGTTTTGGGCAGTAATCACAGTTCTTGAGTGCTATG
AGTTCAAGAGTGCTACGATCACGTCATACTTAGAGTGTTGTCTCACCCCA
TACCATCCTTTAGCTTTTATAGCCTCTCTGCAATCTCTCCTGCAATGTTC
CCTGGGTTTTGGAAGGGGTGATTTAGAGATCTCATTTCTGGCTGAGCATT
AAACAGCCACTTGTTGTCAGTGGAAGTATGATCCGTTACATGTGTCTGCA
GTTACCGCTGCCTACTGTGAGAAGCAGAGGCTCTGACCAACTCAGACAGC
AGGGTGCTTTCATTTTTAGCACTTCCTCTTGATCCTTTCTTAGACACTCC
ATATGTCTGCTTATGTTATCAGTGTGTTGTTAGTGTAACTTTTTCCATCA
CAGCTTTGAGGGTATTGATCATAGCTATTTTAAGTTTCTGGTATGGCAAT
TTCAGAAATCTCTGCCATATGTGAGTCTGGTTCTGTGTGGTTTGGGTTTT
ATATTATATTATTTATGTATCTTTTGGCTTGCTTTGCTAACTTTTGTTGG
AAGCTGAATGTCATGGGTAGAAAAGAGGAAGTGAAGGAAATGCCTTGAAG
TTCTGTTTGGTTACAAATTAGACTGTAGTTACCATTTG

Query= MSMg01no531_h23.b1 MSMg01no531_h23.b1 CHROMAT_FILE:
MSMg01no531_h23.b1 PHD_FILE: MSMg01no531_h23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:08 2005
         (656 letters)



>mm_chr16_46283579_46284634
          Length = 1056

 Score = 1152 bits (596), Expect = 0.0
 Identities = 639/656 (97%), Gaps = 6/656 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   gacaaagcaattagactgtggccggaagaggaataaaacttaaaagtaaaaacaccgaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 931 gacaaagcaattagactgtggccggaagaggaataaaacttaaaagtaaaaacaccgaca 872

                                                                       
Query: 61  gatgtggtaataacacacacctttagtccctacactttggagggctgaggggccagtgga 120
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 871 gatgtggtaataacacacacctttagtccctgcactttggagggctgaggggccagtgga 812

                                                                       
Query: 121 tctcagtttgaggctagccttgtctacagagccagttccaggatagtcaggaccacatag 180
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 811 tctcagtttgaggctagccttgtctatagagccagttccaggatagtcaggaccacatag 752

                                                                       
Query: 181 agaaactttgtctcaaaacgaaacaaaaataaacaaataaataccacaaagagtgaaaac 240
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 agaaactttgtctcaaaatgaaacaaaaataaacaaataaataccacaaagagtgaaaac 692

                                                                       
Query: 241 tccagctcttatgttccttttccaggaaggctgtcatttggagggtcaacatttactaag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 tccagctcttatgttccttttccaggaaggctgtcatttggagggtcaacatttactaag 632

                                                                       
Query: 301 acctttctgttgtcacttttggtttcaacaaaggaagtttcagtggcactggcctcctta 360
           ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 631 accttcctgttgtcacttttggtttcaacaaaggaagtttcagtggtactggcctcctta 572

                                                                       
Query: 361 atccaattgctaaatccaccattctgtcctcagcatttgattttgtctccatggagatca 420
           |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 571 atccaattgctaaatctaccattctgtcctcagcatttgactttgtctccatggagatca 512

                                                                       
Query: 421 cttcagggaaatctttagtaaggtgagtagcagttttcagtgtgagaaagaaagcactgg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 cttcagggaaatctttagtaaggtgagtagcagttttcagtgtgagaaagaaagcactgg 452

                                                                       
Query: 481 atgagtgcttcagggccacaaatgttagcaaacattaacattagctggggctggggctgg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 atgagtgcttcagggccacaaatgttagcaaacattaacattagctggggctggggctgg 392

                                                                       
Query: 541 agctggggctggggctggggctggggctggggctggggctggggctggggctggggctgg 600
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 391 ggctggggctggggctggggctggggctggggctggggctggggctggtgctggtgctgg 332

                                                                   
Query: 601 ngctgggactgtagctctgtgggcattgtgcttacatgtgtgagacctgagttcag 656
              ||   ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 331 ---tg---ctgtagctctgtgggcattgtgcttacatgtgtgagacctgggttcag 282


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 58
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space:   675716
Effective search space used:   675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)