Query= MSMg01no531_m20.b1 MSMg01no531_m20.b1 CHROMAT_FILE:
MSMg01no531_m20.b1 PHD_FILE: MSMg01no531_m20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:33 2005
(622 letters)
>mm_chr16_75784338_75785359
Length = 1022
Score = 1062 bits (549), Expect = 0.0
Identities = 605/629 (96%), Gaps = 14/629 (2%)
Strand = Plus / Plus
Query: 5 gaattctttgcttaa---cactgaattagaaaacacaatccaggttacacggaaatctgc 61
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gaattctttgc--aaaaacactgaattagaaaacacaatccaggttacacggaaatctgc 254
Query: 62 cactgcaatttctaaatgtgggaggaagtaggaaactttcagaaaattcaccaacttaaa 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 cactgcaatttctaaatgtgggaggaagtaggaaactttcagaaaattcaccaacttaaa 314
Query: 122 agaactgtagagtaagtttctttctgtaacacacacacacacacacacacacacacaca- 180
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 315 agaactgtagagtaagtttctttctataacacacacacacacacacacacacacacacaa 374
Query: 181 -----caaa-cagatgaaagctacaagaagttaatatggtttataaaagctacagaacgg 234
|||| |||||||||||||||||||||||||||||||||||||| || |||| ||
Sbjct: 375 acacacaaaacagatgaaagctacaagaagttaatatggtttataaaaactttagaatgg 434
Query: 235 aacttactggaaaaggaatgtttcatttgttctacaaatgataaagtaaaagatactcac 294
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 435 aacttacgggaaaaggaatgtttcatttgttctacaactgataaagtaaaagatactcac 494
Query: 295 cagagagataaatctagatccagatgcctccagaattttggtattcttatctccattatc 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 cagagagataaatctagatccagatgcctccagaattttggtattcttatctccattatc 554
Query: 355 tctatctcctttcccagatgtctaacaatttcatgtatagatccttgtcctactttctcc 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tctatctcctttcccagatgtctaacaatttcatgtatagatccttgtcctactttctcc 614
Query: 415 cttcgatttcccaa-tggaaagtgtggtgcttgtctttgtggaactgcctttctgtcagg 473
|||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 615 cttcgatttcccaaatg-aaagtttggtgcttgtctttgtggaactgcctttctgtcagg 673
Query: 474 tgtcttatttagggttcctattgctctgatgaaacacagtgaccaaaagcagcttgggga 533
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 tgtcttatttagggttcttgttgctctgatgaaacacagtgaccaaaagcagcttgggga 733
Query: 534 gggaagggtttatttggcttacacttccatgttgtaagaattgactaaaggaagtcagga 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 gggaagggtttatttggcttacacttccatgttgtaagaattgactaaaggaagtcagga 793
Query: 594 caggaacatgagcaggacaggaacctgga 622
|||||||||||||||||||||||||||||
Sbjct: 794 caggaacatgagcaggacaggaacctgga 822
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space: 619344
Effective search space used: 619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no531_m20.g1 MSMg01no531_m20.g1 CHROMAT_FILE:
MSMg01no531_m20.g1 PHD_FILE: MSMg01no531_m20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:33 2005
(573 letters)
>mm_chr16_75928774_75929746
Length = 973
Score = 1093 bits (565), Expect = 0.0
Identities = 571/573 (99%)
Strand = Plus / Minus
Query: 1 tgagaatgcaggagtaatctatcaaagcagcaggctgggatgaaaactaaatcctaatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 tgagaatgcaggagtaatctatcaaagcagcaggctgggatgaaaactaaatcctaatgt 714
Query: 61 gtatatgtgggaagaaaatgaaaaaataacccagagaagaaattgcctttgaatttcttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 gtatatgtgggaagaaaatgaaaaaataacccagagaagaaattgcctttgaatttcttc 654
Query: 121 atgacaagcaaccattgcctgaaacatataatgcaaagatgaaaactgttaaaaaaaagt 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 653 atgacaagcaaccattgcctgaaacatataatgcaaagatgaaaactgtttaaaaaaagt 594
Query: 181 agtcatcatattatgtaagagaatattttcagagaaaacgaagtcaatttgtatgatatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 agtcatcatattatgtaagagaatattttcagagaaaacgaagtcaatttgtatgatatt 534
Query: 241 tcttagtacatccaatacccgagaacaagaataatcccgggagaccttattctgttaaag 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 533 tcttagtacatccaatacccgagaacaagaataatcccgggagaacttattctgttaaag 474
Query: 301 tggtgagttgtttcataaatcaactctatgaacctcctttcttatgagtaagaaaatctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 tggtgagttgtttcataaatcaactctatgaacctcctttcttatgagtaagaaaatctg 414
Query: 361 caagacattagctcacatgttcagtctttatttacaagaaggaaaaccatgacttaagac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 caagacattagctcacatgttcagtctttatttacaagaaggaaaaccatgacttaagac 354
Query: 421 attgaggtccttggatagtggataacaaagcttggctcactggaagaggtcttactgagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 attgaggtccttggatagtggataacaaagcttggctcactggaagaggtcttactgagt 294
Query: 481 gttgatgtggcttccaatagacttcctgtgtatgggaaacccttcctgtgaaaagattct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 gttgatgtggcttccaatagacttcctgtgtatgggaaacccttcctgtgaaaagattct 234
Query: 541 gtgaaaagattctgcgctggaaaatatgtcaga 573
|||||||||||||||||||||||||||||||||
Sbjct: 233 gtgaaaagattctgcgctggaaaatatgtcaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 973
Length adjustment: 10
Effective length of query: 563
Effective length of database: 963
Effective search space: 542169
Effective search space used: 542169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
