Query= MSMg01no533_p07.b1 MSMg01no533_p07.b1 CHROMAT_FILE:
MSMg01no533_p07.b1 PHD_FILE: MSMg01no533_p07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:17 2005
(558 letters)
>mm_chr16_26528758_26529717
Length = 960
Score = 845 bits (437), Expect = 0.0
Identities = 470/481 (97%), Gaps = 2/481 (0%)
Strand = Plus / Minus
Query: 1 acaatttcctctgtttttac-ataacaacatgtgtcctcttttccttctctcccgttctt 59
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 481 acaatttcctctgtttttacaataacaacatgtgtcctcttttccttctcgcccgttctt 422
Query: 60 gagagctttgcttcctcggatccttctatgcaaatgtgagtgtattcgaatgtaagtgac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gagagctttgcttcctcggatccttctatgcaaatgtgagtgtattcgaatgtaagtgac 362
Query: 120 ctcattagtaggaaaatcaattgtccatgttcagctagagttccctgtgattatttcacg 179
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 361 ctcattagtaggaaaatcaattgtccatgttcagctagagttccctgtgattccttcact 302
Query: 180 aagacatgtccacgctcataagcacagttagggagatgctttaaggatacagcctaaaca 239
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggacatgtccacgctcataagcacagttagggagatgctttaaggatacagcctaaaca 242
Query: 240 gt-aaggaaaaaaaaaatctgtggatggctattctcttccagtaagttttatagttgtgg 298
|| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtaaagaaaaaaaaaaatctgtggatggctattctcttccagtaagttttatagttgtgg 182
Query: 299 taccacaaattattatgcaagatgctgccactagggaaatcgggttaaaaggagatacaa 358
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 181 taccacaaattattatgcaagatgctgccattagggaaatcgggttaaaaggagatacaa 122
Query: 359 gctccattctggttcttaaaacaacaagtgtcgctccaattaccttcaaatagaacatct 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctccattctggttcttaaaacaacaagtgtcgctccaattaccttcaaatagaacatct 62
Query: 419 acgaagaattcaggacagctgtctttcatcatcaccattttcctcccggtcacctacctg 478
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 61 acaaagaattcaggacagctgtctttcatcatcacaattttcctcccggtcacctacctg 2
Query: 479 t 479
|
Sbjct: 1 t 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 960
Length adjustment: 10
Effective length of query: 548
Effective length of database: 950
Effective search space: 520600
Effective search space used: 520600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no533_p07.g1 MSMg01no533_p07.g1 CHROMAT_FILE:
MSMg01no533_p07.g1 PHD_FILE: MSMg01no533_p07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:17 2005
(599 letters)
>mm_chr16_26384283_26385281
Length = 999
Score = 1135 bits (587), Expect = 0.0
Identities = 596/599 (99%)
Strand = Plus / Plus
Query: 1 agctgctgagcatggtctccttgctgtcttcctctgctgtgtcatactgacagatgcata 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agctgctgagcatggcctccttgctgtcttcctctgctgtgtcatactgacagatgcata 260
Query: 61 caccacatccccaccggcttcattaaatattgactgaacaaacagtttactaaacatagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caccacatccccaccggcttcattaaatattgactgaacaaacagtttactaaacatagt 320
Query: 121 tccgggtcttcgatcaggcagacacttgtctctgattttgttcagtattatcttgtgaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccgggtcttcgatcaggcagacacttgtctctgattttgttcagtattatcttgtgaat 380
Query: 181 ctttgacaggttacaggaaaaaatatttaaatgtgatctagactgtcctgggtgcaattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctttgacaggttacaggaaaaaatatttaaatgtgatctagactgtcctgggtgcaattt 440
Query: 241 gataaacagaagtcaaatatagttttagttgttagtaatgtctttttttcctttttattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gataaacagaagtcaaatatagttttagttgttagtaatgtctttttttcctttttattt 500
Query: 301 tttatttttttgagttctgatatggatttcatcaaatacacaatcatcatatctttggaa 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 tttatttttttgagttctgatatggatttcatcaaatacacaatcatcgtatctttggaa 560
Query: 361 aatttctctttgtagttctaaaaataagctcatcggttttctgtggctactataataatc 420
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatttctgtttgtagttctaaaaataagctcatcggttttctgtggctactataataatc 620
Query: 421 actagtttaataatttaaaagaatagatataataatcataataaataaatattacacatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 actagtttaataatttaaaagaatagatataataatcataataaataaatattacacatt 680
Query: 481 tacataatataaaacatttattgttttatatatgattaaaaataaaaccaaaaccctaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tacataatataaaacatttattgttttatatatgattaaaaataaaaccaaaaccctaaa 740
Query: 541 tgtgtctcataggattaaagttgtcagcaaggtcacctacttttctggaactttttgga 599
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgtgtctcataggattaaagttgtcagcaaggtcacctacttttctggaactttttgga 799
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space: 582521
Effective search space used: 582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
